Pre_GI: BLASTP Hits

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Query: NC_012917:3565268:3567012 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3567012, End: 3568172, Length: 1161

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013850:1198134:1198134119813411992941161Klebsiella variicola At-22 chromosome, complete genomechorismate mutase6e-177620
NC_009648:3192483:3211024321102432121841161Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomebifunctional chorismate mutase/prephenate dehydratase9e-177619
CU928160:2785792:2804811280481128059711161Escherichia coli IAI1 chromosome, complete genomefused chorismate mutase P ; prephenate dehydratase1e-176619
CP002516:1196000:1196020119602011971801161Escherichia coli KO11, complete genomechorismate mutase1e-176619
CP002185:2889656:2908677290867729098371161Escherichia coli W, complete genomefused chorismate mutase P/prephenate dehydratase1e-176619
NC_011080:2789744:2810782281078228119421161Salmonella enterica subsp. enterica serovar Newport str. SL254,P-protein5e-169593
NC_006905:2805877:2825494282549428266541161Salmonella enterica subsp. enterica serovar Choleraesuis strbifuctional: chorismate mutase P; prephenate dehydratase5e-169593
NC_003198:2703013:2724137272413727252971161Salmonella enterica subsp. enterica serovar Typhi str. CT18,chorismate mutase-P/prephenate dehydratase1e-168592
NC_011184:597496:5974965974965986741179Vibrio fischeri MJ11 chromosome I, complete sequenceP-protein9e-126450
NC_008570:1143578:1189671118967111908431173Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomechorismate mutase/prephenate dehydratase4e-123441
NC_016901:1527877:1535943153594315379371995Shewanella baltica OS678 chromosome, complete genomechorismate mutase3e-119429
NC_009665:1495473:1504373150437315063671995Shewanella baltica OS185 chromosome, complete genomechorismate mutase4e-119428
NC_009052:1394000:1401615140161514036091995Shewanella baltica OS155, complete genomechorismate mutase9e-119427
NC_004545:392685:4121354121354132501116Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeP-protein7e-75281
NC_017030:3668146:3670098367009836712371140Corallococcus coralloides DSM 2259 chromosome, complete genomechorismate mutase/prephenate dehydratase4e-61235
NC_014614:757381:7732637732637743721110Clostridium sticklandii, complete genomePheA4e-49195
NC_015732:3017387:3033512303351230355122001Spirochaeta caldaria DSM 7334 chromosome, complete genomephospho-2-dehydro-3-deoxyheptonate aldolase1e-43177
NC_009253:829913:8379458379458390871143Desulfotomaculum reducens MI-1 chromosome, complete genomeprephenate dehydratase8e-43174
NC_007404:974461:1013368101336810144651098Thiobacillus denitrificans ATCC 25259, complete genomeChorismate mutase1e-42173
NC_011146:3720658:3751589375158937526681080Geobacter bemidjiensis Bem, complete genomechorismate mutase2e-42173
NC_016077:8545:316383163832486849Acidaminococcus intestini RyC-MR95 chromosome, complete genomechorismate mutase3e-41169
NC_015731:2950874:2990077299007729911471071Nitrosomonas sp. Is79A3 chromosome, complete genomechorismate mutase3e-41169
NC_015379:1887275:1887275188727518883691095Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Prephenate dehydratase (bifunctional chorismate mutase P and prephenate dehydratase)6e-40165
NC_016830:1901488:1901488190148819025821095Pseudomonas fluorescens F113 chromosome, complete genomeprotein PheA4e-40165
NC_015682:1457004:1474754147475414758301077Thermodesulfobacterium sp. OPB45 chromosome, complete genomeprephenate dehydratase7e-40164
NC_010814:2275199:2296553229655322976291077Geobacter lovleyi SZ, complete genomechorismate mutase9e-40164
NC_012660:1804610:1805695180569518067891095Pseudomonas fluorescens SBW25 chromosome, complete genomechorismate mutase/prephenate dehydratase1e-39164
NC_009656:1994392:1995477199547719965741098Pseudomonas aeruginosa PA7 chromosome, complete genomechorismate mutase1e-39164
NC_007298:1334876:1338605133860513396961092Dechloromonas aromatica RCB, complete genomeChorismate mutase, gamma, beta and epsilon proteobacteria1e-39164
NC_010162:10894592:1092010710920107109211861080Sorangium cellulosum 'So ce 56', complete genomechorismate mutase2e-39163
NC_004129:4993974:5012938501293850140321095Pseudomonas fluorescens Pf-5, complete genomechorismate mutase/prephenate dehydrogenase2e-39163
NC_018080:1834754:1835839183583918369361098Pseudomonas aeruginosa DK2 chromosome, complete genomechorismate mutase5e-39162
NC_008463:2017607:2018692201869220197891098Pseudomonas aeruginosa UCBPP-PA14, complete genomeprephenate dehydratase5e-39162
NC_011770:2046490:2047575204757520486721098Pseudomonas aeruginosa LESB58, complete genomechorismate mutase5e-39162
NC_020209:997385:9973859973859984791095Pseudomonas poae RE*1-1-14, complete genomeP-protein1e-38160
NC_008027:1559083:1563062156306215641561095Pseudomonas entomophila L48, complete genomebifunctional chorismate mutase/prephenate dehydratase PheA1e-38160
NC_009439:2038303:2038303203830320393971095Pseudomonas mendocina ymp, complete genomeprephenate dehydratase1e-38160
NC_015573:2323268:2345906234590623471711266Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomePrephenate dehydratase1e-38160
NC_015410:2144387:2144387214438721454811095Pseudomonas mendocina NK-01 chromosome, complete genomeprephenate dehydratase1e-38160
NC_010003:1724500:173860817386081739543936Petrotoga mobilis SJ95, complete genomePrephenate dehydratase2e-38159
NC_015275:820723:836861836861837805945Clostridium lentocellum DSM 5427 chromosome, complete genomePrephenate dehydratase4e-38159
NC_010524:1005355:1026373102637310274971125Leptothrix cholodnii SP-6, complete genomechorismate mutase4e-38159
NC_008781:2925818:2937641293764129387231083Polaromonas naphthalenivorans CJ2, complete genomechorismate mutase5e-38159
NC_013741:1304000:1307226130722613090851860Archaeoglobus profundus DSM 5631, complete genomeprephenate dehydratase5e-38158
NC_012440:197728:2017252017252028101086Persephonella marina EX-H1, complete genomechorismate mutase/prephenate dehydratase8e-38157
NC_002939:2844240:2875863287586328769391077Geobacter sulfurreducens PCA, complete genomechorismate mutase/prephenate dehydratase1e-36154
NC_012108:2542328:2543820254382025449351116Desulfobacterium autotrophicum HRM2, complete genomePheA9e-37154
NC_009654:3215205:3235190323519032363111122Marinomonas sp. MWYL1, complete genomechorismate mutase4e-35149
NC_014624:551510:554549554549555451903Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-34147
NC_003902:1858349:1858349185834918595691221Xanthomonas campestris pv. campestris str. ATCC 33913, completeP-protein2e-34147
NC_014166:401815:4130034130034140701068Arcobacter nitrofigilis DSM 7299 chromosome, complete genomechorismate mutase5e-34145
NC_015422:2078618:2078618207861820797181101Alicycliphilus denitrificans K601 chromosome, complete genomechorismate mutase2e-33143
NC_020419:977778:9892419892419903201080Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completechorismate mutase/prephenate dehydratase4e-33142
NC_020419:782337:7925547925547936331080Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completechorismate mutase/prephenate dehydratase4e-33142
NS_000191:977778:9892419892419903201080Uncultured Termite group 1 bacterium phylotype Rs-D17, completechorismate mutase/prephenate dehydratase4e-33142
NS_000191:782337:7925547925547936331080Uncultured Termite group 1 bacterium phylotype Rs-D17, completechorismate mutase/prephenate dehydratase4e-33142
NC_004663:5099845:511033651103365111184849Bacteroides thetaiotaomicron VPI-5482, complete genomeprephenate dehydratase8e-33141
NC_015387:1344467:135964813596481360475828Marinithermus hydrothermalis DSM 14884 chromosome, complete genomePrephenate dehydratase8e-33141
NC_009454:489954:5095605095605107441185Pelotomaculum thermopropionicum SI, complete genomeprephenate dehydratase7e-33141
NC_008009:2430509:244656724465672447418852Acidobacteria bacterium Ellin345, complete genomePrephenate dehydratase3e-32139
NC_014248:685656:701774701774702655882Nostoc azollae 0708 chromosome, complete genomeprephenate dehydratase1e-31137
NC_015703:4483500:4484120448412044851931074Runella slithyformis DSM 19594 chromosome, complete genomechorismate mutase1e-31137
NC_020195:330000:338740338740339573834Blattabacterium sp. (Blatta orientalis) str. Tarazona, completeprephenate dehydratase6e-31135
NC_021175:687839:687839687839688687849Streptococcus oligofermentans AS 1.3089, complete genomeprephenate dehydratase2e-30134
NC_015164:3431279:343456934345693435411843Bacteroides salanitronis DSM 18170 chromosome, complete genomePrephenate dehydratase1e-30134
NC_014831:2082304:2113290211329021143391050Thermaerobacter marianensis DSM 12885 chromosome, complete genomePrephenate dehydratase9e-30131
NC_016148:1877711:1915193191519319162871095Thermovirga lienii DSM 17291 chromosome, complete genomePrephenate dehydratase2e-29130
NC_014408:1455851:147659814765981477419822Methanothermobacter marburgensis str. Marburg chromosome, completeprephenate dehydratase3e-29129
NC_014934:2482934:249753024975302498357828Cellulophaga algicola DSM 14237 chromosome, complete genomeprephenate dehydratase3e-28126
NC_009635:518000:522038522038522874837Methanococcus aeolicus Nankai-3 chromosome, complete genomeprephenate dehydratase9e-28124
NC_017030:3668146:366927236692723670105834Corallococcus coralloides DSM 2259 chromosome, complete genomeprephenate dehydratase2e-27124
NC_019771:2816732:282031328203132821185873Anabaena cylindrica PCC 7122, complete genomeprephenate dehydratase2e-27123
NC_014654:422013:426177426177427043867Halanaerobium sp. 'sapolanicus' chromosome, complete genomePrephenate dehydratase1e-26120
NC_019907:46994:677256772568576852Liberibacter crescens BT-1 chromosome, complete genomeprephenate dehydratase2e-26120
NC_013156:226215:243275243275244084810Methanocaldococcus fervens AG86, complete genomeprephenate dehydratase3e-26119
NC_007413:1570000:157458815745881575475888Anabaena variabilis ATCC 29413, complete genomeprephenate dehydratase2e-25117
NC_008817:1476473:148095514809551481800846Prochlorococcus marinus str. MIT 9515, complete genomeChorismate mutase-Prephenate dehydratase3e-25116
NC_017192:2505369:2522212252221225232311020Arcobacter sp. L, complete genomechorismate mutase/prephenate dehydratase3e-25116
NC_003272:5184000:518815751881575189029873Nostoc sp. PCC 7120, complete genomeprephenate dehydratase1e-24114
NC_015574:2221220:222603922260392226857819Methanobacterium sp. SWAN-1 chromosome, complete genomePrephenate dehydratase2e-24113
NC_009840:1485383:152082115208211521666846Prochlorococcus marinus str. MIT 9215, complete genomeChorismate mutase-Prephenate dehydratase4e-21102
NC_008816:1416711:145104014510401451885846Prochlorococcus marinus str. AS9601, complete genomeChorismate mutase-Prephenate dehydratase5e-2099
NC_009091:1423677:142813914281391428984846Prochlorococcus marinus str. MIT 9301, complete genomeChorismate mutase-Prephenate dehydratase1e-1997.8
NC_017200:4240500:425447542544754255326852Bacillus thuringiensis serovar finitimus YBT-020 chromosome,prephenate dehydratase1e-1997.4
NC_013715:98000:115714115714116661948Rothia mucilaginosa DY-18, complete genomeprephenate dehydratase1e-1894.7
NC_017347:2017097:203925220392522040046795Staphylococcus aureus subsp. aureus T0131 chromosome, completePrephenate dehydratase1e-1584.3
NC_016027:2512297:254195125419512542931981Gluconacetobacter xylinus NBRC 3288, complete genomeprephenate dehydratase4e-1582.8
NC_006087:237500:237687237687238670984Leifsonia xyli subsp. xyli str. CTCB07, complete genomeprephenate dehydratase3e-1582.8
NC_008701:1039304:103930410393041040092789Pyrobaculum islandicum DSM 4184, complete genomePrephenate dehydratase1e-1377.8
NC_016906:408720:437349437349438317969Gordonia polyisoprenivorans VH2 chromosome, complete genomeprephenate dehydratase PheA3e-1066.2
NC_008593:1917118:194520819452081945591384Clostridium novyi NT, complete genomeprephenate dehydratase, putative6e-0755.5