Pre_GI: BLASTP Hits

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Query: NC_012917:3565268:3565268 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3565268, End: 3566002, Length: 735

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CP002516:1196000:119804211980421198779738Escherichia coli KO11, complete genomeouter membrane assembly lipoprotein YfiO1e-110399
CP002185:2889656:290707829070782907815738Escherichia coli W, complete genomepredicted lipoprotein1e-110399
CU928160:2785792:280321228032122803949738Escherichia coli IAI1 chromosome, complete genomeputative lipoprotein1e-110399
NC_011080:2789744:280918428091842809921738Salmonella enterica subsp. enterica serovar Newport str. SL254,outer membrane assembly lipoprotein YfiO4e-110397
NC_011149:2701916:272009427200942720831738Salmonella enterica subsp. enterica serovar Agona str. SL483,outer membrane assembly lipoprotein YfiO4e-110397
NC_003198:2703013:272253927225392723276738Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lipoprotein1e-109395
NC_006905:2805877:282389628238962824633738Salmonella enterica subsp. enterica serovar Choleraesuis strputative lipoprotein2e-109395
NC_013850:1198134:120015612001561200893738Klebsiella variicola At-22 chromosome, complete genomeouter membrane assembly lipoprotein YfiO2e-109395
NC_009648:3192483:320942632094263210163738Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeouter membrane protein assembly complex subunit YfiO2e-109395
NC_011184:597496:599583599583600308726Vibrio fischeri MJ11 chromosome I, complete sequencecompetence lipoprotein ComL1e-71269
NC_008260:497855:516462516462517280819Alcanivorax borkumensis SK2, complete genomecompetence lipoprotein ComL, putative3e-45181
NC_015556:4118304:411942641194264120415990Pseudomonas fulva 12-X chromosome, complete genomeouter membrane assembly lipoprotein YfiO3e-45181
NC_010995:3821327:382394738239473824930984Cellvibrio japonicus Ueda107, complete genomecompetence protein ComL4e-45181
NC_007645:6049340:605120960512096052036828Hahella chejuensis KCTC 2396, complete genomeDNA uptake lipoprotein3e-44178
NC_018080:5192264:5193372519337251943971026Pseudomonas aeruginosa DK2 chromosome, complete genomecompetence protein ComL3e-44178
NC_008463:5364428:5364428536442853654531026Pseudomonas aeruginosa UCBPP-PA14, complete genomecompetence lipoprotein ComL3e-44178
NC_009439:1075170:109303510930351094027993Pseudomonas mendocina ymp, complete genomeDNA uptake lipoprotein-like protein1e-43176
NC_008740:979830:997325997325998158834Marinobacter aquaeolei VT8, complete genomeDNA uptake lipoprotein2e-43175
NC_015410:1144272:116107011610701162062993Pseudomonas mendocina NK-01 chromosome, complete genomeDNA uptake lipoprotein-like protein2e-43175
NC_016002:1975000:202347820234782024269792Pseudogulbenkiania sp. NH8B, complete genomecompetence lipoprotein ComL1e-42173
NC_003112:719490:734869734869735672804Neisseria meningitidis MC58, complete genomecompetence lipoprotein ComL6e-42171
NC_010120:662969:676317676317677120804Neisseria meningitidis 053442, complete genomecompetence lipoprotein3e-41168
NC_017517:749031:766249766249767052804Neisseria meningitidis M01-240355 chromosome, complete genomecompetence lipoprotein comL3e-41168
NC_003116:867943:883784883784884587804Neisseria meningitidis Z2491, complete genomecompetence lipoprotein3e-41168
NC_013016:633313:646352646352647155804Neisseria meningitidis alpha14 chromosome, complete genomeDNA uptake lipoprotein3e-41168
NC_017501:1633436:163852816385281639331804Neisseria meningitidis 8013, complete genomecompetence lipoprotein ComL3e-41168
NC_017505:721395:737795737795738598804Neisseria meningitidis alpha710 chromosome, complete genomecompetence lipoprotein3e-41168
NC_017512:642229:654633654633655436804Neisseria meningitidis WUE 2594, complete genomecompetence lipoprotein ComL3e-41168
NC_017514:1520245:152246815224681523271804Neisseria meningitidis M01-240149 chromosome, complete genomecompetence lipoprotein comL3e-41168
NC_017518:795113:811512811512812315804Neisseria meningitidis NZ-05/33 chromosome, complete genomecompetence lipoprotein comL3e-41168
NC_017515:1555500:155776215577621558565804Neisseria meningitidis M04-240196 chromosome, complete genomecompetence lipoprotein comL3e-41168
NC_007484:755058:774396774396775181786Nitrosococcus oceani ATCC 19707, complete genomeprobable transmembrane protein3e-38158
NC_008781:1973826:198790219879021988726825Polaromonas naphthalenivorans CJ2, complete genomeputative transmembrane protein6e-33140
NC_004344:589375:615964615964616644681Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein3e-1995.5
NC_007940:1178000:119200511920051192766762Rickettsia bellii RML369-C, complete genomeDNA uptake lipoprotein2e-1686.7
NC_009883:343067:349375349375350136762Rickettsia bellii OSU 85-389, complete genomeDNA uptake lipoprotein2e-1686.7
NC_013173:1231213:124487112448711245584714Desulfomicrobium baculatum DSM 4028, complete genomeouter membrane assembly lipoprotein YfiO7e-1684.3
NC_020300:1041523:104545110454511046344894Bartonella australis Aust/NH1, complete genomecompetence lipoprotein comL precursor3e-1478.6
NC_003103:225956:240210240210240965756Rickettsia conorii str. Malish 7, complete genomehypothetical protein8e-1477.4
NC_012730:332500:338861338861339616756Rickettsia peacockii str. Rustic, complete genomeComL family lipoprotein1e-1273.6
NC_016930:228000:241908241908242663756Rickettsia philipii str. 364D chromosome, complete genomeComL family lipoprotein1e-1273.2
NC_010263:232482:243972243972244727756Rickettsia rickettsii str. Iowa, complete genomelipoprotein, ComL family3e-1272.4
NC_009882:232400:243878243878244633756Rickettsia rickettsii str. 'Sheila Smith', complete genomehypothetical protein3e-1272.4
NC_016909:230000:243832243832244587756Rickettsia rickettsii str. Arizona chromosome, complete genomeComL family lipoprotein3e-1272.4
NC_016911:232481:243920243920244675756Rickettsia rickettsii str. Hauke chromosome, complete genomeComL family lipoprotein3e-1272.4
NC_016913:917500:924387924387925142756Rickettsia rickettsii str. Brazil chromosome, complete genomeComL family lipoprotein3e-1272.4
NC_016914:231324:244059244059244814756Rickettsia rickettsii str. Hino chromosome, complete genomeComL family lipoprotein3e-1272.4
NC_012846:1551000:155494615549461555839894Bartonella grahamii as4aup, complete genomecompetence lipoprotein ComL precursor3e-1272
NC_020301:1132927:113684711368471137743897Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomecompetence lipoprotein comL precursor6e-1271.2
NC_014932:1084422:109394610939461094866921Bartonella clarridgeiae 73, complete genomecompetence lipoprotein precursor1e-1170.5
NC_009881:236500:248071248071248814744Rickettsia akari str. Hartford, complete genomehypothetical protein1e-1170.1
NC_005955:1029435:103339210333921034285894Bartonella quintana str. Toulouse, complete genomeCompetence lipoprotein comL precursor1e-1170.1
NC_005956:1221352:122994812299481230841894Bartonella henselae str. Houston-1, complete genomeCompetence lipoprotein comL precursor1e-1170.1
NC_020409:329915:339507339507340235729Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeOuter membrane assembly lipoprotein YfiO3e-1168.9
NC_009900:231983:246219246219246974756Rickettsia massiliae MTU5, complete genomeDNA uptake lipoprotein3e-1168.6
NC_009879:200419:206730206730207473744Rickettsia canadensis str. McKiel, complete genomehypothetical protein5e-1168.2
NC_017042:310000:324732324732325487756Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completeDNA uptake lipoprotein6e-1167.8
NC_016931:232981:244446244446245201756Rickettsia massiliae str. AZT80 chromosome, complete genomeDNA uptake lipoprotein6e-1167.8
NC_016929:197403:207721207721208464744Rickettsia canadensis str. CA410 chromosome, complete genomehypothetical protein6e-1167.8
NC_015866:233448:246160246160246915756Rickettsia heilongjiangensis 054 chromosome, complete genomeDNA uptake lipoprotein1e-1067
NC_016050:236000:247216247216247971756Rickettsia japonica YH, complete genomehypothetical protein1e-1067
NC_017028:316000:327173327173327928756Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeDNA uptake lipoprotein1e-1067
NC_017058:1200500:120659012065901207333744Rickettsia australis str. Cutlack chromosome, complete genomehypothetical protein1e-1067
NC_015681:1201926:121829812182981219038741Thermodesulfatator indicus DSM 15286 chromosome, complete genomeouter membrane assembly lipoprotein YfiO2e-1066.6
NC_017048:547712:562367562367563122756Rickettsia prowazekii str. GvV257 chromosome, complete genomehypothetical protein1e-1066.6
NC_017057:205771:220426220426221181756Rickettsia prowazekii str. RpGvF24 chromosome, complete genomehypothetical protein1e-1066.6
NC_000963:205546:220202220202220957756Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein1e-1066.6
NC_017049:203748:218402218402219157756Rickettsia prowazekii str. Chernikova chromosome, complete genomehypothetical protein1e-1066.6
NC_017050:205547:220203220203220958756Rickettsia prowazekii str. Katsinyian chromosome, complete genomehypothetical protein1e-1066.6
NC_017051:203752:218406218406219161756Rickettsia prowazekii str. Dachau chromosome, complete genomehypothetical protein1e-1066.6
NC_017056:205558:220211220211220966756Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomehypothetical protein1e-1066.6
NC_011296:801612:808364808364809110747Thermodesulfovibrio yellowstonii DSM 11347, complete genometetratricopeptide repeat domain protein6e-1064.7
NC_013501:777947:777947777947778789843Rhodothermus marinus DSM 4252, complete genomeouter membrane assembly lipoprotein YfiO6e-1064.7