Pre_GI: BLASTP Hits

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Query: NC_012917:3378759:3386115 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3386115, End: 3386453, Length: 339

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:2270000:229164022916402291999360Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-42171
NC_008150:650899:651813651813652127315Yersinia pestis Antiqua, complete genomeputative DNA-binding prophage protein3e-26117
NC_008149:3251196:326848332684833268797315Yersinia pestis Nepal516, complete genomeDNA-binding prophage protein3e-26117
NC_009381:2939782:295706829570682957382315Yersinia pestis Pestoides F chromosome, complete genomeDNA-binding prophage protein3e-26117
NC_014029:1283500:128427412842741284588315Yersinia pestis Z176003 chromosome, complete genomeDNA-binding prophage protein3e-26117
NC_017160:1507500:152493015249301525244315Yersinia pestis D182038 chromosome, complete genomeDNA-binding prophage protein3e-26117
NC_017168:4155143:415709341570934157407315Yersinia pestis A1122 chromosome, complete genomeputative DNA-binding prophage protein3e-26117
NC_004088:3382148:339943433994343399754321Yersinia pestis KIM, complete genomehypothetical protein3e-26117
NC_005810:1130251:114753811475381147858321Yersinia pestis biovar Microtus str. 91001, complete genomeputative DNA-binding prophage protein3e-26117
NC_003143:1233128:123507112350711235391321Yersinia pestis CO92, complete genomeputative DNA-binding prophage protein3e-26117
NC_017265:1136000:113640111364011136721321Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative DNA-binding prophage protein3e-26117
NC_005126:1223042:124160412416041241915312Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-25112
NC_012962:1827000:184627318462731846575303Photorhabdus asymbiotica, complete genomehypothetical protein5e-23106
NC_013959:2801557:281505728150572815389333Sideroxydans lithotrophicus ES-1 chromosome, complete genomeaddiction module antidote protein5e-1992.8
NC_004578:6089958:610795261079526108296345Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-1891.3
NC_014365:2888897:289710528971052897440336Desulfarculus baarsii DSM 2075 chromosome, complete genomeputative addiction module antidote protein2e-1890.9
NC_015713:1594114:161339816133981613691294Simkania negevensis Z chromosome gsn.131, complete genomehypothetical protein2e-1271.2
NC_021150:3667176:367890136789013679221321Azotobacter vinelandii CA6, complete genometranscriptional regulator3e-1270.9
NC_012560:3667177:367890236789023679222321Azotobacter vinelandii DJ, complete genometranscriptional regulator3e-1270.9
NC_014910:242845:277930277930278247318Alicycliphilus denitrificans BC chromosome, complete genometranscriptional regulator6e-1269.3
NC_008740:2989856:299684629968462997169324Marinobacter aquaeolei VT8, complete genomeputative transcriptional regulator8e-1165.9
NC_008782:3110744:312702031270203127334315Acidovorax sp. JS42, complete genomeputative transcriptional regulator3e-1063.5
NC_019697:1879769:190119619011961901522327Chamaesiphon minutus PCC 6605, complete genomeputative addiction module antidote protein4e-1063.2
NC_007275:1:387338734169297Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completetranscriptional regulator, Cro/CI family1e-0962
NC_008609:2840249:285128028512802851732453Pelobacter propionicus DSM 2379, complete genomeputative transcriptional regulator1e-0961.6
NC_015731:2148517:216347321634732163799327Nitrosomonas sp. Is79A3 chromosome, complete genomeaddiction module antidote protein2e-0961.2
NC_009655:1357486:136691113669111367201291Actinobacillus succinogenes 130Z chromosome, complete genomeputative transcriptional regulator5e-0959.7
NC_020829:5620826:562475656247565625049294Pseudomonas denitrificans ATCC 13867, complete genomeputative transcriptional regulator5e-0959.7
NC_005230:32647:358913589136178288Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequencehypothetical protein6e-0856.2
NC_010278:1918000:194414319441431944451309Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,transcriptional regulator7e-0855.8
NC_010939:1986263:202145920214592021767309Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein9e-0855.5
NC_010943:325739:337899337899338201303Stenotrophomonas maltophilia K279a, complete genomeputative HTH family transcriptional regulator2e-0754.7
NC_014246:1402500:143472214347221435015294Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative transcription regulator2e-0754.3
NC_017059:1727095:173389717338971734196300Rhodospirillum photometricum DSM 122, complete genometranscriptional regulator5e-0753.1
NC_006513:3486558:349299634929963493298303Azoarcus sp. EbN1, complete genomeconserved hypothetical protein, putative regulator5e-0753.1
NC_014228:2883500:288483428848342885118285Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-0652
NC_009925:1003000:101152210115221011815294Acaryochloris marina MBIC11017, complete genomeaddiction module antitoxin, putative2e-0651.2
NC_013892:1272448:127244812724481272732285Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-0650.1
NC_013416:939668:942588942588942884297Aggregatibacter actinomycetemcomitans D11S-1, complete genomeputative transcriptional regulator8e-0648.9
NC_005126:3204980:320905132090513209344294Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0548.9