Pre_GI: BLASTP Hits

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Query: NC_012917:3198000:3220616 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3220616, End: 3221680, Length: 1065

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1545386:1544325154432515453891065Pectobacterium wasabiae WPP163, complete genomeperiplasmic binding protein0707
NC_020418:2868000:2873350287335028743931044Morganella morganii subsp. morganii KT, complete genomeIron(III) ABC transporter, solute-binding protein1e-126453
NC_016513:1761830:1763372176337217644181047Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeiron chelation ABC transporter periplasmic-binding protein4e-126451
NC_013416:1429881:1434921143492114359671047Aggregatibacter actinomycetemcomitans D11S-1, complete genomeiron chelatin ABC transporter periplasmic-binding protein4e-126451
NC_013741:838243:8518538518538529231071Archaeoglobus profundus DSM 5631, complete genomeperiplasmic binding protein2e-31136
NC_009515:1409912:1413398141339814144981101Methanobrevibacter smithii ATCC 35061, complete genomeiron(III) ABC transporter, substrate-binding component2e-28127
NC_009975:1374500:1397266139726613983541089Methanococcus maripaludis C6, complete genomeperiplasmic binding protein1e-28127
NC_013385:1617338:1629574162957416310251452Ammonifex degensii KC4, complete genomecopper amine oxidase domain protein7e-28124
NC_008701:195850:2139832139832160312049Pyrobaculum islandicum DSM 4184, complete genomeperiplasmic binding protein6e-27121
NC_013665:1766158:1795446179544617964591014Methanocella paludicola SANAE, complete genomeputative iron compound ABC transporter iron compound binding protein7e-27121
NC_018870:115982:1547051547051558321128Thermacetogenium phaeum DSM 12270 chromosome, complete genomeABC transporter, periplasmic binding protein6e-26118
NC_000909:67729:7963079630807511122Methanocaldococcus jannaschii DSM 2661, complete genomeiron transport periplasmic binding protein, putative (ceuE)8e-25114
NC_015573:2187688:2205510220551022065471038Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein3e-24113
NC_015562:1571928:1571928157192815730761149Methanotorris igneus Kol 5 chromosome, complete genomeABC transporter periplasmic protein2e-23110
NC_011296:1039749:105309110530911054038948Thermodesulfovibrio yellowstonii DSM 11347, complete genomeperiplasmic binding protein8e-23108
NC_008553:1717000:1728270172827017294991230Methanosaeta thermophila PT, complete genomeperiplasmic binding protein2e-22107
NC_013156:381910:3892973892973904091113Methanocaldococcus fervens AG86, complete genomeperiplasmic binding protein2e-22107
NC_014364:3707311:3733944373394437350171074Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeperiplasmic binding protein3e-22105
NC_008553:1038344:1057487105748710587761290Methanosaeta thermophila PT, complete genomeperiplasmic binding protein5e-22105
NC_015416:1832759:1835301183530118365631263Methanosaeta concilii GP-6 chromosome, complete genomeperiplasmic binding protein5e-22105
NC_002944:4147431:4149262414926241502991038Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein1e-21104
NC_006138:3355028:3369082336908233701101029Desulfotalea psychrophila LSv54, complete genomeiron (III) ABC transporter, periplasmic-binding protein2e-21103
NC_015519:426948:4620474620474631681122Tepidanaerobacter sp. Re1 chromosome, complete genomeABC transporter periplasmic subunit2e-21103
NC_018515:595500:6215726215726226961125Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeFe3+-hydroxamate ABC transporter periplasmic protein2e-21103
NC_011059:1391734:1402708140270814037481041Prosthecochloris aestuarii DSM 271, complete genomeperiplasmic binding protein3e-21103
NC_014831:1557485:1558876155887615599131038Thermaerobacter marianensis DSM 12885 chromosome, complete genomeperiplasmic binding protein3e-21102
NC_013887:407771:4103024103024128272526Methanocaldococcus sp. FS406-22 chromosome, complete genomehypothetical protein5e-21102
NC_015573:110108:1179781179781191351158Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter periplasmic protein1e-20101
NC_018645:3977352:3977352397735239784161065Desulfobacula toluolica Tol2, complete genomeiron(III) dictrate ABC transporter substrate-binding protein3e-2099.8
NC_013385:1617338:1631096163109616321601065Ammonifex degensii KC4, complete genomeperiplasmic binding protein4e-2099
NC_001263:2574755:2595145259514525961521008Deinococcus radiodurans R1 chromosome 1, complete sequenceiron ABC transporter, periplasmic substrate-binding protein, putative5e-2099
NC_007955:1108000:1129377112937711304891113Methanococcoides burtonii DSM 6242, complete genomeFe3+-hydroxamate binding protein2e-1893.2
NC_016627:4203775:4204817420481742058331017Clostridium clariflavum DSM 19732 chromosome, complete genomeFe3+-hydroxamate ABC transporter periplasmic protein6e-1892
NC_008553:1267580:1273621127362112746851065Methanosaeta thermophila PT, complete genomeperiplasmic binding protein8e-1891.7
NC_008553:1717000:1723077172307717242101134Methanosaeta thermophila PT, complete genomeperiplasmic binding protein2e-1790.5
NC_017192:2153461:2161345216134521623611017Arcobacter sp. L, complete genomeABC transporter substrate binding component4e-1789
NC_010634:3692321:3712721371272137138211101Yersinia pseudotuberculosis PB1/+, complete genomeperiplasmic binding protein7e-1788.6
NC_008149:3529428:3549603354960335507031101Yersinia pestis Nepal516, complete genomehypothetical protein7e-1788.6
NC_010159:138879:1603571603571614571101Yersinia pestis Angola, complete genomeABC transporter, periplasmic substrate-binding protein7e-1788.6
NC_008150:361224:3633613633613644611101Yersinia pestis Antiqua, complete genomehypothetical protein7e-1788.6
NC_010465:933488:9334889334889345881101Yersinia pseudotuberculosis YPIII, complete genomeperiplasmic binding protein7e-1788.6
NC_009381:627685:6276856276856287851101Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein7e-1788.6
NC_009708:986918:9869189869189880181101Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeABC transporter periplasmic protein7e-1788.6
NC_014029:1001000:1001057100105710021571101Yersinia pestis Z176003 chromosome, complete genomehypothetical protein7e-1788.6
NC_017154:941065:9432029432029443021101Yersinia pestis D106004 chromosome, complete genomehypothetical protein7e-1788.6
NC_017168:50391:5047550475515751101Yersinia pestis A1122 chromosome, complete genomehypothetical protein7e-1788.6
NC_018870:81396:9768097680988071128Thermacetogenium phaeum DSM 12270 chromosome, complete genomeABC transporter, periplasmic binding protein6e-1788.6
NC_004088:3661601:3681768368176836828771110Yersinia pestis KIM, complete genomesolute-binding periplasmic protein of ABC transporter6e-1788.6
NC_008942:1768588:1768588176858817696431056Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-1687.8
NC_007355:544796:5615555615555627091155Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceFe(III) dicitrate ABC transporter, permease9e-1787.8
NC_005090:1082213:1082213108221310832321020Wolinella succinogenes DSM 1740, complete genomeORF2 PROTEIN1e-1687.4
NC_014507:611625:6315546315546328191266Methanoplanus petrolearius DSM 11571 chromosome, complete genomeperiplasmic binding protein1e-1687.4
NC_017192:2153461:216852521685252169505981Arcobacter sp. L, complete genomeiron ABC transporter substrate binding component3e-1686.7
NC_008701:37219:5356953569556352067Pyrobaculum islandicum DSM 4184, complete genomeperiplasmic binding protein1e-1584.3
NC_015563:3266004:3292870329287032940811212Delftia sp. Cs1-4 chromosome, complete genomeABC transporter periplasmic protein1e-1584.3
NC_019940:3480690:3497943349794334990011059Thioflavicoccus mobilis 8321 chromosome, complete genomeFe3+-hydroxamate ABC transporter substrate-binding protein1e-1584.3
NC_017192:2153461:2156053215605321570841032Arcobacter sp. L, complete genomeiron ABC transporter substrate binding component2e-1583.6
NC_008701:195850:2030262030262042071182Pyrobaculum islandicum DSM 4184, complete genomeperiplasmic binding protein2e-1583.2
NC_015680:21500:5110851108530751968Pyrococcus yayanosii CH1 chromosome, complete genomePeriplasmic binding protein5e-1582.4
NC_014222:799229:8103888103888116021215Methanococcus voltae A3 chromosome, complete genomeperiplasmic binding protein5e-1582
NC_017243:1813158:183567418356741836612939Brachyspira intermedia PWS/A chromosome, complete genomeiron compound ABC transporter substrate-binding protein5e-1479
NC_009637:1421885:1430888143088814321471260Methanococcus maripaludis C7 chromosome, complete genomeperiplasmic binding protein7e-1478.6
NC_014958:3346500:336923533692353370122888Deinococcus maricopensis DSM 21211 chromosome, complete genomeABC transporter periplasmic subunit7e-1478.6
NC_015709:1459838:1500050150005015010991050Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeperiplasmic binding protein1e-1377.8
NC_010609:1077453:1084700108470010857221023Lactobacillus reuteri JCM 1112, complete genomeiron(III) ABC transporter substrate binding component1e-1377.8
NC_016048:1438721:1452498145249814536521155Oscillibacter valericigenes Sjm18-20, complete genomeputative ABC transporter substrate-binding protein1e-1377.8
NC_014150:648868:654241654241655185945Brachyspira murdochii DSM 12563 chromosome, complete genomeperiplasmic binding protein2e-1376.6
NC_013592:956829:9630759630759641811107Dickeya dadantii Ech586, complete genomeperiplasmic binding protein4e-1375.9
NC_016641:3173250:3180233318023331812371005Paenibacillus terrae HPL-003 chromosome, complete genomeFe3+-hydroxamate ABC transporter periplasmic protein7e-1375.1
NC_014507:611625:6369756369756380451071Methanoplanus petrolearius DSM 11571 chromosome, complete genomeperiplasmic binding protein6e-1375.1
NC_015276:1426000:1446619144661914477131095Marinomonas mediterranea MMB-1 chromosome, complete genomeABC-type transporter, periplasmic subunit1e-1274.7
NC_015160:1467445:1469521146952114706121092Odoribacter splanchnicus DSM 20712 chromosome, complete genomeperiplasmic binding protein1e-1274.3
NC_015566:3417951:3455176345517634562821107Serratia sp. AS12 chromosome, complete genomeABC transporter periplasmic protein2e-1273.6
NC_014622:1514416:1520936152093615219431008Paenibacillus polymyxa SC2 chromosome, complete genomeABC transporter substrate-binding protein3e-1273.2
NC_009637:1421885:1428463142846314296831221Methanococcus maripaludis C7 chromosome, complete genomeperiplasmic binding protein3e-1273.2
NC_014483:1376500:1383180138318013841871008Paenibacillus polymyxa E681 chromosome, complete genomeABC-type Fe3+-hydroxamate transport system, periplasmic component6e-1272
NC_017192:20404:2140721407224261020Arcobacter sp. L, complete genomeiron ABC transporter substrate binding component2e-1170.5
NC_008553:1717000:1724924172492417260421119Methanosaeta thermophila PT, complete genomeperiplasmic binding protein2e-1170.1
NC_008800:614850:6378366378366389811146Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative iron transporter9e-1168.2
NC_015224:647341:6703166703166714611146Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative iron transporter7e-1065.1
NC_018604:1385788:139100813910081391895888Brachyspira pilosicoli WesB complete genomeiron-compound ABC transporter periplasmic iron compound-binding protein9e-1064.7
NC_014838:589581:6117686117686128531086Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceperiplasmic binding protein1e-0964.3
NC_008010:105665:126435126435127304870Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceperiplasmic binding protein2e-0963.9
NC_013943:1019213:1036823103682310379051083Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeperiplasmic binding protein2e-0963.9
NC_014330:2457731:246390024639002464787888Brachyspira pilosicoli 95/1000 chromosome, complete genomeiron-compound ABC transporter periplasmic iron compound-binding protein2e-0963.2
NC_019908:748635:775903775903776790888Brachyspira pilosicoli P43/6/78 chromosome, complete genomeiron-compound ABC transporter substrate-binding protein8e-0961.6
NC_015276:855150:873376873376874221846Marinomonas mediterranea MMB-1 chromosome, complete genomeABC-type transporter, periplasmic subunit8e-0961.6
NC_016641:4151403:4154494415449441555131020Paenibacillus terrae HPL-003 chromosome, complete genomeABC transporter substrate-binding protein9e-0961.6
NC_010718:2513917:252235825223582523326969Natranaerobius thermophilus JW/NM-WN-LF, complete genomeperiplasmic binding protein1e-0860.8
NC_016884:3219030:322258932225893223530942Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeABC transporter periplasmic protein1e-0860.8
NC_014258:42262:5883758837598471011Pantoea vagans C9-1 plasmid pPag3, complete sequenceputative iron(III) ABC transporter periplasmic solute-binding protein1e-0860.8
NC_008570:1852286:186623018662301867051822Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeperiplasmic binding protein1e-0860.8
NC_015757:2343193:234677323467732347693921Sulfobacillus acidophilus TPY chromosome, complete genomeperiplasmic binding protein2e-0860.5
NC_014122:842560:8633848633848644361053Methanocaldococcus infernus ME chromosome, complete genomeperiplasmic binding protein3e-0859.7
NC_018607:1185195:119137211913721192253882Brachyspira pilosicoli B2904 chromosome, complete genomeperiplasmic binding protein3e-0859.7
NC_013530:2492312:2496224249622424973001077Xylanimonas cellulosilytica DSM 15894, complete genomeperiplasmic binding protein3e-0859.7
NC_009348:2836969:284033728403372841143807Aeromonas salmonicida subsp. salmonicida A449, complete genomecobalamin binding protein BtuF4e-0859.3
NC_015275:820723:8322618322618332621002Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, periplasmic subunit8e-0858.2
NC_019940:3089884:308988430898843090873990Thioflavicoccus mobilis 8321 chromosome, complete genomeFe3+-hydroxamate ABC transporter substrate-binding protein2e-0757
NC_015428:1668465:167188816718881672793906Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeheme ABC transporter heme-binding protein isdE1e-0654.3
NC_009641:1105075:114723711472371148115879Staphylococcus aureus subsp. aureus str. Newman chromosome,iron compound ABC transporter1e-0654.3
NC_013520:120214:124327124327125280954Veillonella parvula DSM 2008, complete genomeperiplasmic binding protein2e-0653.9
NC_016745:1719800:1721630172163017227631134Oceanimonas sp. GK1 chromosome, complete genomeiron ABC transporter substrate binding protein2e-0653.9
NC_013939:492959:509877509877510701825Deferribacter desulfuricans SSM1, complete genomeiron ABC transporter substrate-binding protein2e-0653.5
NC_015424:1603000:162345416234541624257804Aeromonas veronii B565 chromosome, complete genomeperiplasmic binding protein3e-0653.1
NC_006138:225832:233094233094233993900Desulfotalea psychrophila LSv54, complete genomeFe(III) ABC transporter, periplasmic substrate-binding protein3e-0653.1
NC_013530:3365742:3383886338388633849081023Xylanimonas cellulosilytica DSM 15894, complete genomeperiplasmic binding protein4e-0652.4