Pre_GI: BLASTP Hits

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Query: NC_012917:2921932:2936082 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2936082, End: 2939513, Length: 3432

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:1970686:1976824197682419802433420Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein02097
NC_013592:1730505:1738842173884217422943453Dickeya dadantii Ech586, complete genomeMethyltransferase regulatory domain, predicted0949
NC_012912:1788308:1797617179761718010513435Dickeya zeae Ech1591, complete genomeMethyltransferase type 120883
NC_014121:1357339:1377923137792313812583336Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative SAM-dependent methyltransferases/Predicted O-linked N-acetylglucosamine transferase0680
NC_016514:2950860:2965370296537029687503381Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein0666
NC_007651:3656433:3656433365643336587782346Burkholderia thailandensis E264 chromosome I, complete sequenceTPR domain protein6e-93343
NC_014117:3375796:3377641337764133825454905Burkholderia sp. CCGE1002 chromosome chromosome 1, completeTetratricopeptide TPR_2 repeat protein1e-89332
NC_010002:661696:6786256786256815492925Delftia acidovorans SPH-1, complete genomeTetratricopeptide TPR_2 repeat protein2e-89331
NC_015563:606783:6147786147786175792802Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein5e-79296
NC_010002:960027:9682399682399701821944Delftia acidovorans SPH-1, complete genomeTPR repeat-containing protein1e-78295
NC_010162:9641549:9649807964980796518672061Sorangium cellulosum 'So ce 56', complete genomeTPR domain-containing protein2e-76288
NC_002939:2844240:2867897286789728696541758Geobacter sulfurreducens PCA, complete genomeTPR domain/SEC-C motif domain protein4e-74280
NC_010814:2217153:2227048222704822321925145Geobacter lovleyi SZ, complete genomeTPR repeat-containing protein2e-70268
NC_002977:1600350:1607847160784716099462100Methylococcus capsulatus str. Bath, complete genomeTPR domain protein1e-69265
NC_007963:2232000:2239021223902122432684248Chromohalobacter salexigens DSM 3043, complete genomesulfotransferase5e-67257
NC_013851:2211120:2227959222795922299592001Allochromatium vinosum DSM 180 chromosome, complete genomeTetratricopeptide TPR_2 repeat protein6e-65250
NC_010725:4035397:4100670410067041028412172Methylobacterium populi BJ001, complete genomeTetratricopeptide TPR_2 repeat protein7e-63243
NC_008576:2011959:2028673202867320315792907Magnetococcus sp. MC-1, complete genomeTetratricopeptide TPR_2 repeat protein1e-62242
NC_013851:2211120:2226033222603322279311899Allochromatium vinosum DSM 180 chromosome, complete genomeTPR repeat-containing protein1e-59232
NC_017068:2569609:2578412257841225811712760Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein6e-58226
NC_019902:97987:1077261077261099452220Thioalkalivibrio nitratireducens DSM 14787, complete genomeTPR domain protein, putative component of TonB system1e-52209
NC_017068:2569609:2582126258212625838141689Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-52209
NC_006576:1551939:1566358156635815682771920Synechococcus elongatus PCC 6301, complete genomeSPY protein8e-51202
NC_007604:41495:5260652606545071902Synechococcus elongatus PCC 7942, complete genomeTPR repeat1e-50202
NC_008340:774206:7786307786307813952766Alkalilimnicola ehrlichei MLHE-1, complete genomemethyltransferase FkbM family1e-50202
NC_015186:132567:1445611445611467622202Acidiphilium multivorum AIU301, complete genomehypothetical protein5e-48193
NC_009484:98250:1119441119441141452202Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein1e-47192
NC_010002:661696:6686236686236702841662Delftia acidovorans SPH-1, complete genomeTetratricopeptide domain protein3e-45184
NC_014722:1:1783017830195691740Burkholderia rhizoxinica HKI 454, complete genomemethyltransferase1e-42176
NC_003454:1346500:1359401135940113609541554Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeMethyltransferase4e-39164
NC_012791:2423466:2429404242940424316262223Variovorax paradoxus S110 chromosome 1, complete genomeTPR repeat-containing protein1e-38162
NC_010571:5127812:5138055513805551396621608Opitutus terrae PB90-1, complete genomeMethyltransferase type 127e-38160
NC_011989:2549252:2565675256567525677172043Agrobacterium vitis S4 chromosome 1, complete sequencehypothetical protein7e-36153
NC_012559:2563922:2575213257521325777322520Laribacter hongkongensis HLHK9, complete genomeTPR repeat protein2e-35152
NC_009714:1404000:1420549142054914220931545Campylobacter hominis ATCC BAA-381, complete genomeputative methyltransferase3e-34147
NC_008820:1766973:1787759178775917889461188Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein3e-33144
NC_008536:1462344:1476448147644814777641317Solibacter usitatus Ellin6076, complete genomeMethyltransferase type 126e-33144
NC_017042:77363:7736377363789671605Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completeputative methyltransferase8e-32140
NC_009883:1429000:1451269145126914524891221Rickettsia bellii OSU 85-389, complete genomePutative methyltransferase8e-32140
NC_016931:38350:5513355133567371605Rickettsia massiliae str. AZT80 chromosome, complete genomeputative methyltransferase6e-32140
NC_007513:75197:1170371170371192112175Synechococcus sp. CC9902, complete genomeTPR repeat1e-31139
NC_011884:732000:7479207479207501392220Cyanothece sp. PCC 7425, complete genomeTPR repeat-containing protein1e-31139
NC_017044:15697:3358733587351911605Rickettsia parkeri str. Portsmouth chromosome, complete genomePutative methyltransferase2e-31138
NC_010263:13826:3297832978345821605Rickettsia rickettsii str. Iowa, complete genomemethyltransferase5e-31137
NC_017065:13188:3371433714353181605Rickettsia slovaca str. D-CWPP chromosome, complete genomePutative methyltransferase6e-31137
NC_016639:13188:3371733717353211605Rickettsia slovaca 13-B chromosome, complete genomePutative methyltransferase6e-31137
NC_012633:12000:3037630376319801605Rickettsia africae ESF-5, complete genomePutative methyltransferase7e-31137
NC_016930:11721:3126631266328701605Rickettsia philipii str. 364D chromosome, complete genomemethyltransferase7e-31137
NC_009882:13826:3298632986345901605Rickettsia rickettsii str. 'Sheila Smith', complete genomehypothetical protein5e-31137
NC_016908:13826:3298832988345921605Rickettsia rickettsii str. Colombia chromosome, complete genomemethyltransferase5e-31137
NC_016909:16465:3298032980345841605Rickettsia rickettsii str. Arizona chromosome, complete genomemethyltransferase5e-31137
NC_016911:13826:3297732977345811605Rickettsia rickettsii str. Hauke chromosome, complete genomemethyltransferase5e-31137
NC_016913:1134000:1134346113434611359501605Rickettsia rickettsii str. Brazil chromosome, complete genomemethyltransferase5e-31137
NC_016914:13826:3306533065346691605Rickettsia rickettsii str. Hino chromosome, complete genomemethyltransferase5e-31137
NC_017043:735150:7525387525387541421605Rickettsia montanensis str. OSU 85-930 chromosome, complete genomeputative methyltransferase4e-31137
NC_016915:13927:3302533025346291605Rickettsia rickettsii str. Hlp#2 chromosome, complete genomemethyltransferase7e-31136
NC_003103:12114:3047130471320751605Rickettsia conorii str. Malish 7, complete genomehypothetical protein3e-30135
NC_011884:732000:7456957456957479112217Cyanothece sp. PCC 7425, complete genomeTPR repeat-containing protein8e-30133
NC_004113:1026886:1034604103460410379843381Thermosynechococcus elongatus BP-1, complete genomehypothetical protein8e-29130
NC_007513:75197:1149021149021170822181Synechococcus sp. CC9902, complete genomeO-linked N-acetylglucosamine transferase SPINDLY family-like1e-27125
NC_003272:637970:6548436548436570622220Nostoc sp. PCC 7120, complete genomehypothetical protein6e-26120
NC_007413:2961611:2974646297464629768682223Anabaena variabilis ATCC 29413, complete genomehypothetical protein8e-26120
NC_017277:1283477:1292215129221512943682154Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-23112
NC_017052:1283720:1292458129245812946112154Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein2e-23112
NC_017039:1283732:1292470129247012946232154Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein2e-23112
NC_000911:1284552:1293398129339812955512154Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-23112
NC_007643:2722265:2722265272226527277785514Rhodospirillum rubrum ATCC 11170, complete genomeGlycosyl transferase2e-20102
NC_007775:1002934:1020398102039810242493852Synechococcus sp. JA-3-3Ab, complete genomemethyltransferase, FkbM family6e-1997.1
NC_007776:474361:4856834856834893183636Synechococcus sp. JA-2-3B'a(2-13), complete genomemethyltransferase, FkbM family1e-1689.7
NC_007776:474361:4743614743614763341974Synechococcus sp. JA-2-3B'a(2-13), complete genomeTPR domain protein3e-1585.1
NC_010571:5127812:5134282513428251367172436Opitutus terrae PB90-1, complete genomeTetratricopeptide TPR_2 repeat protein3e-1275.1
NC_007413:2961611:2965749296574929687723024Anabaena variabilis ATCC 29413, complete genomeGlycosyl transferase, family 26e-1170.9
NC_003272:637970:6503286503286533693042Nostoc sp. PCC 7120, complete genomehypothetical protein7e-1067
NC_017277:2039097:2059918205991820614381521Synechocystis sp. PCC 6803, complete genomehypothetical protein4e-0964.7
NC_000911:2043938:2061101206110120626211521Synechocystis sp. PCC 6803, complete genomehypothetical protein4e-0964.7