Pre_GI: BLASTP Hits

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Query: NC_012917:2921932:2931914 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2931914, End: 2932882, Length: 969

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:1970686:198343619834361984404969Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein8e-175612
NC_012917:2921932:293288229328822933841960Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein2e-60233
NC_004547:1970686:198247719824771983436960Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-60232
NC_007651:3656433:366194336619433662902960Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein8e-40164
NC_012883:1817358:183728718372871838213927Thermococcus sibiricus MM 739, complete genomehypothetical protein2e-35150
NC_008702:2942246:295333429533342954254921Azoarcus sp. BH72, complete genomeconserved hypothetical protein3e-34145
NC_010622:2576110:258748225874822588405924Burkholderia phymatum STM815 chromosome 1, complete sequencehypothetical protein3e-31135
NC_012207:1681971:169089016908901691789900Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein1e-30134
NC_009565:1688642:169756116975611698460900Mycobacterium tuberculosis F11, complete genomehypothetical protein1e-30134
NC_002755:1684161:169308016930801693979900Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein1e-30134
NC_015848:1708176:171709517170951717994900Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein1e-30134
NC_008769:1709078:171799717179971718896900Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein1e-30134
NC_012943:2707677:271964327196432720542900Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein1e-30134
NC_016768:2704350:271631627163162717215900Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-30134
NC_016804:1679357:168827616882761689175900Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein1e-30134
NC_017026:1686500:169394016939401694839900Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-30134
NC_000962:1684005:169292416929241693823900Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein2e-30133
NC_009525:1685522:169444116944411695340900Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein2e-30133
NC_010612:2777687:278635927863592787267909Mycobacterium marinum M, complete genomehypothetical protein1e-29130
NC_019950:1689910:169626616962661697165900Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein1e-29130
NC_014539:860402:867089867089868015927Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein7e-29128
NC_009719:3532587:355213335521333553074942Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein1e-24114
NC_002945:1680751:168999916899991690568570Mycobacterium bovis AF2122/97, complete genomehypothetical protein9e-1787.8
NC_008380:855246:866143866143867084942Rhizobium leguminosarum bv. viciae 3841, complete genomehypothetical protein1e-1687.4