Pre_GI: BLASTP Hits

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Query: NC_012917:2641000:2662363 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2662363, End: 2662866, Length: 504

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012731:2261787:226291022629102263416507Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomethiol peroxidase3e-73273
NC_011080:1750000:177194017719401772446507Salmonella enterica subsp. enterica serovar Newport str. SL254,thiol peroxidase3e-72270
NC_003197:1753663:177558417755841776090507Salmonella typhimurium LT2, complete genomethiol peroxidase3e-72270
NC_016856:1763640:178556217855621786068507Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sthiol peroxidase3e-72270
NC_016860:1752000:177327517732751773781507Salmonella enterica subsp. enterica serovar Typhimurium strthiol peroxidase3e-72270
NC_016863:1711832:173375417337541734260507Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1thiol peroxidase3e-72270
NC_015663:4447984:446699944669994467505507Enterobacter aerogenes KCTC 2190 chromosome, complete genomethiol peroxidase5e-72269
NC_020181:969599:969599969599970105507Enterobacter aerogenes EA1509E, complete genomeThiol peroxidase, Tpx-type5e-72269
NC_008800:2298000:231509123150912315594504Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,thiol peroxidase2e-71268
NC_009792:1345500:135656613565661357072507Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-70263
NC_021066:1778000:179359117935911794097507Raoultella ornithinolytica B6, complete genomethiol peroxidase8e-68255
NC_015222:1843093:186157718615771862074498Nitrosomonas sp. AL212 chromosome, complete genomeRedoxin domain-containing protein3e-56217
NC_015501:154590:154590154590155114525Porphyromonas asaccharolytica DSM 20707 chromosome, completethiol peroxidase2e-48191
NC_011027:1427343:143096214309621431462501Chlorobaculum parvum NCIB 8327, complete genomeRedoxin domain protein3e-48191
NC_011744:688000:700905700905701402498Vibrio splendidus LGP32 chromosome 2, complete genomeThiol peroxidase5e-48189
NC_016783:1374464:137853713785371379034498Corynebacterium diphtheriae INCA 402 chromosome, complete genomethiol peroxidase2e-47188
NC_016789:1334514:140004514000451400542498Corynebacterium diphtheriae PW8 chromosome, complete genomethiol peroxidase2e-47188
NC_016801:1361597:139936513993651399862498Corynebacterium diphtheriae C7 (beta) chromosome, complete genomethiol peroxidase2e-47188
NC_002935:1378566:138054413805441381041498Corynebacterium diphtheriae NCTC 13129, complete genomethiol peroxidase1e-47188
NC_016788:1349500:135364713536471354144498Corynebacterium diphtheriae HC04 chromosome, complete genomethiol peroxidase1e-47188
NC_016802:1317365:135513513551351355632498Corynebacterium diphtheriae HC02 chromosome, complete genomethiol peroxidase1e-47188
NC_016785:1321700:133582013358201336317498Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomethiol peroxidase1e-47188
NC_016790:1319060:132103813210381321535498Corynebacterium diphtheriae VA01 chromosome, complete genomethiol peroxidase1e-47188
NC_016799:1343020:140968914096891410186498Corynebacterium diphtheriae 31A chromosome, complete genomethiol peroxidase1e-47188
NC_016800:1378728:138280113828011383298498Corynebacterium diphtheriae BH8 chromosome, complete genomethiol peroxidase1e-47188
NC_016932:1246235:126076612607661261272507Corynebacterium pseudotuberculosis 316 chromosome, complete genomethiol peroxidase1e-46185
NC_017031:1261289:127583612758361276342507Corynebacterium pseudotuberculosis P54B96 chromosome, completeThiol peroxidase1e-46185
NC_017301:1261167:127571312757131276219507Corynebacterium pseudotuberculosis C231 chromosome, completeThiol peroxidase1e-46185
NC_017303:1261311:127585612758561276362507Corynebacterium pseudotuberculosis I19 chromosome, complete genomeThiol peroxidase1e-46185
NC_017305:1258840:127338512733851273891507Corynebacterium pseudotuberculosis PAT10 chromosome, completeThiol peroxidase1e-46185
NC_011026:3044717:306596930659693066469501Chloroherpeton thalassium ATCC 35110, complete genomeRedoxin domain protein3e-46184
NC_017300:1258861:127340612734061273912507Corynebacterium pseudotuberculosis 1002 chromosome, completeThiol peroxidase2e-46184
NC_019940:1837863:185713318571331857633501Thioflavicoccus mobilis 8321 chromosome, complete genomeperoxiredoxin3e-46183
NC_009614:4844000:485845648584564858959504Bacteroides vulgatus ATCC 8482 chromosome, complete genomethiol peroxidase1e-45182
NC_003228:3212500:323663432366343237134501Bacteroides fragilis NCTC 9343, complete genomeputative thiol peroxidase2e-45181
NC_006347:3166000:317526431752643175764501Bacteroides fragilis YCH46, complete genomeputative thiol peroxidase2e-45181
NC_016776:3258939:327403232740323274532501Bacteroides fragilis 638R, complete genomeputative thiol peroxidase2e-45181
NC_018678:2382708:238735023873502387847498Alteromonas macleodii str. 'English Channel 673' chromosome,peroxiredoxin2e-45181
NC_021064:1705961:170884617088461709349504Propionibacterium avidum 44067, complete genomethiol peroxidase2e-44178
NC_016781:1261300:127584512758451276285441Corynebacterium pseudotuberculosis 3/99-5 chromosome, completethiol peroxidase8e-42169
NC_014329:1261480:127602512760251276465441Corynebacterium pseudotuberculosis FRC41 chromosome, completethiol peroxidase8e-42169
NC_009943:970901:974401974401975000600Candidatus Desulfococcus oleovorans Hxd3, complete genomeRedoxin domain protein8e-42169
NC_017904:2724941:275186427518642752358495Mycobacterium sp. MOTT36Y chromosome, complete genomelipid hydroperoxide peroxidase5e-41166
NC_016944:859492:882793882793883287495Vibrio cholerae IEC224 chromosome I, complete sequencelipid hydroperoxide peroxidase2e-40164
NC_009457:351512:376496376496376990495Vibrio cholerae O395 chromosome 2, complete sequencethiol peroxidase3e-40164
NC_012582:882931:907915907915908409495Vibrio cholerae O395 chromosome chromosome I, complete sequencetagD protein3e-40164
NC_002505:860789:885773885773886267495Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetagD protein2e-40164
NC_012578:818241:843226843226843720495Vibrio cholerae M66-2 chromosome I, complete sequencethiol peroxidase2e-40164
NC_012668:2744393:277753727775372778031495Vibrio cholerae MJ-1236 chromosome 1, complete sequencethiol peroxidase2e-40164
NC_016445:338288:363272363272363766495Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completethiol peroxidase2e-40164
NC_015578:3266855:327180932718093272324516Treponema primitia ZAS-2 chromosome, complete genomethiol peroxidase3e-37154
NC_011725:4600000:460128846012884601788501Bacillus cereus B4264 chromosome, complete genomethiol peroxidase2e-36151
NC_011772:4565418:456660445666044567104501Bacillus cereus G9842, complete genomethiol peroxidase6e-36149
NC_009802:1917917:192099819209981921522525Campylobacter concisus 13826, complete genomethiol peroxidase (Scavengase P20)2e-30131
NC_002939:360462:382951382951383466516Geobacter sulfurreducens PCA, complete genomethiol peroxidase7e-28122
NC_015557:30622:338533385334359507Hydrogenobaculum sp. 3684 chromosome, complete genomeRedoxin domain protein3e-27120
NC_020411:28995:338873388734393507Hydrogenobaculum sp. HO, complete genomeRedoxin domain protein3e-27120
NC_015587:28997:338893388934395507Hydrogenobaculum sp. SHO chromosome, complete genomeRedoxin domain protein3e-27120
NC_015711:3313036:332233333223333322848516Myxococcus fulvus HW-1 chromosome, complete genomethiol peroxidase3e-26117
NC_018604:1045774:104780710478071048304498Brachyspira pilosicoli WesB complete genomethiol peroxidase5e-26117
NC_014330:2268773:227080622708062271303498Brachyspira pilosicoli 95/1000 chromosome, complete genomethiol peroxidase5e-26117
NC_018607:1803500:182069918206991821196498Brachyspira pilosicoli B2904 chromosome, complete genomethiol peroxidase5e-26117
NC_019908:982471:100092010009201001417498Brachyspira pilosicoli P43/6/78 chromosome, complete genomethiol peroxidase5e-26117
NC_013171:497499:515441515441515941501Anaerococcus prevotii DSM 20548, complete genomeRedoxin domain protein1e-24112
NC_017295:3472797:347389834738983474392495Clostridium acetobutylicum EA 2018 chromosome, complete genomeThiol peroxidase, TPX5e-24110
NC_015687:3470829:347607634760763476570495Clostridium acetobutylicum DSM 1731 chromosome, complete genomethiol peroxidase5e-24110
NC_003030:3465352:347445034744503474944495Clostridium acetobutylicum ATCC 824, complete genomeThiol peroxidase, TPX5e-24110
NC_011757:517000:550690550690551229540Methylobacterium chloromethanicum CM4, complete genomeRedoxin domain protein3e-1994.4
NC_013171:1194500:121410512141051214614510Anaerococcus prevotii DSM 20548, complete genomeRedoxin domain protein5e-1993.6
NC_012808:2886282:290552229055222906187666Methylobacterium extorquens AM1, complete genomeputative antioxidant enzyme, Tpx-related thiol peroxidase domain2e-1891.7
NC_003106:1786000:180301718030171803484468Sulfolobus tokodaii str. 7, complete genomehypothetical bacterioferritin comigratory protein3e-1064.7
NC_011744:688000:700294700294700908615Vibrio splendidus LGP32 chromosome 2, complete genomethioredoxin peroxidase3e-0960.8
NC_004631:1623511:163036216303621630919558Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative thiol peroxidase7e-0856.6
NC_006511:1273162:128652112865211287078558Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative thiol peroxidase7e-0856.6
NC_011147:1267005:128036412803641280921558Salmonella enterica subsp. enterica serovar Paratyphi A strthiol peroxidase7e-0856.6
NC_003198:1336894:135026313502631350820558Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative thiol peroxidase7e-0856.6
NC_014448:626909:638093638093638611519Mycoplasma hyorhinis HUB-1 chromosome, complete genomeThiol peroxidase6e-0753.5
NC_007677:1872459:188457918845791885079501Salinibacter ruber DSM 13855, complete genomeantioxidant, AhpC/TSA family1e-0652.4
NC_011094:1726000:173287217328721733390519Salmonella enterica subsp. enterica serovar Schwarzengrund strthiol peroxidase2e-0651.6
NC_016613:2596464:260772726077272608191465Vibrio sp. EJY3 chromosome 1, complete sequenceredoxin domain-containing protein2e-0651.6
NC_011080:1750000:175604817560481756566519Salmonella enterica subsp. enterica serovar Newport str. SL254,putative thiol peroxidase3e-0651.2
NC_009718:1470972:148944414894441489899456Fervidobacterium nodosum Rt17-B1, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen4e-0650.8
NC_011060:330437:348052348052348498447Pelodictyon phaeoclathratiforme BU-1, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen6e-0650.1
NC_015957:8569721:857969385796938580151459Streptomyces violaceusniger Tu 4113 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen8e-0649.7