Pre_GI: BLASTP Hits

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Query: NC_012917:2362725:2376728 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2376728, End: 2377774, Length: 1047

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007946:1632025:1655130165513016561551026Escherichia coli UTI89, complete genomeputative phage-related membrane protein2e-68259
NC_017168:3192817:3201622320162232026471026Yersinia pestis A1122 chromosome, complete genomeputative phage-related membrane protein9e-68257
NC_012724:359444:3725843725843737021119Burkholderia glumae BGR1 chromosome 1, complete genomePutative phage-related membrane protein2e-61236
NC_009074:2914053:292631929263192927143825Burkholderia pseudomallei 668 chromosome I, complete sequenceputative phage-related membrane protein5e-43175
NC_017506:3248724:3251087325108732522501164Marinobacter adhaerens HP15 chromosome, complete genomephage-related membrane protein8e-24111
NC_013446:2623528:2637409263740926387191311Comamonas testosteroni CNB-2, complete genomeZonular occludens toxin6e-1891.7
NC_010513:1162232:1177838117783811791661329Xylella fastidiosa M12 chromosome, complete genomehypothetical protein7e-1685.1
NC_010513:1162232:1173126117312611744541329Xylella fastidiosa M12 chromosome, complete genomehypothetical protein7e-1685.1
NC_009052:2512373:2533389253338925345341146Shewanella baltica OS155, complete genomeZonular occludens toxin7e-0858.5
NC_012857:1097400:1109538110953811108841347Ralstonia pickettii 12D chromosome 2, complete genomeZonular occludens toxin1e-0654.7