Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:2362725:2367221 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2367221, End: 2368516, Length: 1296

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005071:1111605:1135586113558611368181233Prochlorococcus marinus str. MIT 9313, complete genomeDUF1879e-0858.5
NC_021066:1393750:1413020141302014144261407Raoultella ornithinolytica B6, complete genomeglycoside hydrolase0659
NC_008258:1750964:1772792177279217741111320Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-180632
NC_004088:1801819:1821509182150918227921284Yersinia pestis KIM, complete genomehypothetical protein2e-147522
NC_003296:941920:9556109556109569531344Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein1e-126453
NC_014632:11925:1444814448156621215Ilyobacter polytropus DSM 2926 chromosome, complete genomehypothetical protein4e-65248
NC_010163:171148:1751911751911769301740Acholeplasma laidlawii PG-8A chromosome, complete genomehypothetical protein2e-43177
NC_016776:3714642:3748454374845437499741521Bacteroides fragilis 638R, complete genomehypothetical protein5e-38159
NC_006087:28490:290672906729405339Leifsonia xyli subsp. xyli str. CTCB07, complete genomehypothetical protein8e-1375.5
NC_003228:3690596:3695904369590436974121509Bacteroides fragilis NCTC 9343, complete genomehypothetical protein5e-62238
NC_014933:3688000:3692372369237236938291458Bacteroides helcogenes P 36-108 chromosome, complete genomehypothetical protein3e-38159
NC_011565:620801:6272686272686287401473Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,hypothetical protein2e-29130
NC_020063:2230000:2269170226917022704861317Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein0655
NC_009792:1479779:1483543148354314846401098Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-173608
NC_010163:171148:1711481711481738682721Acholeplasma laidlawii PG-8A chromosome, complete genomehypothetical protein2e-40166
NC_003228:3690596:3703002370300237044831482Bacteroides fragilis NCTC 9343, complete genomehypothetical protein5e-38159
NC_015519:801929:8225588225588258453288Tepidanaerobacter sp. Re1 chromosome, complete genomehypothetical protein4e-0962.8
NC_007613:1533024:1558078155807815593971320Shigella boydii Sb227, complete genomehypothetical protein2e-180632
NC_016776:3714642:3741395374139537429031509Bacteroides fragilis 638R, complete genomehypothetical protein2e-62240
NC_006347:3760447:3794257379425737957771521Bacteroides fragilis YCH46, complete genomehypothetical protein5e-38159
NS_000195:219785:2796292796292810771449Candidatus Cloacamonas acidaminovoranshypothetical protein1e-0965.1
NC_009708:1694685:1712954171295417142371284Yersinia pseudotuberculosis IP 31758 chromosome, complete genomelipoprotein2e-147522
NC_008149:2411161:2411161241116124124441284Yersinia pestis Nepal516, complete genomelipoprotein2e-147522
NC_014310:811977:8319158319158332581344Ralstonia solanacearum PSI07 megaplasmid, complete sequencelipoprotein yddw9e-127453
NC_011884:831905:8514808514808526671188Cyanothece sp. PCC 7425, complete genomeprotein of unknown function DUF1871e-0757.8
NC_013510:2782240:2788014278801427896121599Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF1871e-69263
NC_014210:4188448:4208888420888842105311644Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF1875e-73275
NC_010465:1724000:1744353174435317456361284Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF1872e-147522
NC_013526:65495:7874678746803501605Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeprotein of unknown function DUF1872e-85317
NC_014150:3139852:3153372315337231551891818Brachyspira murdochii DSM 12563 chromosome, complete genomeprotein of unknown function DUF1875e-43175
NC_017160:2740870:2758920275892027602031284Yersinia pestis D182038 chromosome, complete genomeputative lipoprotein2e-147522
NC_013716:1618249:1631067163106716324431377Citrobacter rodentium ICC168, complete genomeputative lipoprotein0636
NC_006155:3040769:3040769304076930420731305Yersinia pseudotuberculosis IP 32953, complete genomeputative lipoprotein1e-148526
NC_017168:2892000:2911776291177629130591284Yersinia pestis A1122 chromosome, complete genomeputative lipoprotein2e-147522
NC_017265:1521276:1542592154259215438751284Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative lipoprotein2e-147522
NC_005810:2613456:2613456261345626147391284Yersinia pestis biovar Microtus str. 91001, complete genomeputative lipoprotein2e-147522
NC_003143:2849377:2849377284937728506601284Yersinia pestis CO92, complete genomeputative lipoprotein2e-147522
NC_017154:3139614:3159311315931131605941284Yersinia pestis D106004 chromosome, complete genomeputative lipoprotein2e-147522
NC_010159:1861465:1861465186146518627481284Yersinia pestis Angola, complete genomeputative lipoprotein2e-147522
NC_006347:3760447:3787198378719837887061509Bacteroides fragilis YCH46, complete genomeputative secreted protein2e-62240