Pre_GI: BLASTP Hits

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Query: NC_012917:2362725:2363934 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2363934, End: 2365421, Length: 1488

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012214:537000:5385555385555400271473Erwinia pyrifoliae Ep1/96, complete genomeL-2,4-diaminobutyrate decarboxylase0871
NC_015968:3053565:3074748307474830762141467Enterobacter asburiae LF7a chromosome, complete genomePyridoxal-dependent decarboxylase0838
NC_014121:3483976:3498614349861435000801467Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completepyridoxal-dependent decarboxylase0838
NC_020063:2230000:2263872226387222653351464Enterobacteriaceae bacterium strain FGI 57, complete genomePLP-dependent enzyme, glutamate decarboxylase0783
NC_005125:2366778:2377254237725423788521599Gloeobacter violaceus PCC 7421, complete genomeL-2,4-diaminobutyrate decarboxylase5e-98358
NC_010474:19256:3086530865322111347Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequenceL-2,4-diaminobutyrate decarboxylase9e-94344
NC_010336:996661:9983679983679998781512Francisella philomiragia subsp. philomiragia ATCC 25017, completediaminobutyrate decarboxylase4e-92338
NC_015696:517941:5196475196475211581512Francisella sp. TX077308 chromosome, complete genomesiderophore biosynthesis L-2,4-diaminobutyrate decarboxylase5e-92338
NC_007963:1190847:1190847119084711924391593Chromohalobacter salexigens DSM 3043, complete genomePyridoxal-dependent decarboxylase2e-85316
NC_020133:142790:1627641627641642721509Mycobacterium liflandii 128FXT, complete genomeglutamate decarboxylase3e-82306
NC_008752:4665699:4678164467816446796301467Acidovorax avenae subsp. citrulli AAC00-1, complete genomePyridoxal-dependent decarboxylase3e-81303
NC_015138:4666544:4679089467908946804861398Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeDiaminobutyrate decarboxylase7e-81301
NC_005773:4282840:4307552430755243089701419Pseudomonas syringae pv. phaseolicola 1448A, complete genomeL-2,4-diaminobutyrate decarboxylase5e-79295
NC_010572:6463939:6475554647555464770021449Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative amino acid decarboxylase4e-55216
NC_013929:7606749:7618574761857476198931320Streptomyces scabiei 87.22 chromosome, complete genomeamino acid decarboxylase1e-54214
NC_015953:1581542:1605108160510816065081401Streptomyces sp. SirexAA-E chromosome, complete genomepyridoxal-dependent decarboxylase6e-54212
NC_016114:5539021:5550656555065655520561401Streptomyces flavogriseus ATCC 33331 chromosome, complete genomepyridoxal-dependent decarboxylase2e-51203
NC_013440:5944935:5950735595073559522881554Haliangium ochraceum DSM 14365, complete genomePyridoxal-dependent decarboxylase2e-51203
NC_003155:7453994:7463143746314374645851443Streptomyces avermitilis MA-4680, complete genomeamino acid decarboxylase8e-51201
NC_007947:2140000:2173986217398621754581473Methylobacillus flagellatus KT, complete genomePyridoxal-dependent decarboxylase4e-49196
NC_018750:1835500:1839682183968218410641383Streptomyces venezuelae ATCC 10712, complete genomeSiderophore biosynthesis L-2,4-diaminobutyrate decarboxylase5e-48192
NC_015660:1869962:1878086187808618795311446Geobacillus thermoglucosidasius C56-YS93 chromosome, completeglutamate decarboxylase5e-48192
NC_015954:2289717:2295288229528822967361449Halophilic archaeon DL31 chromosome, complete genomeDiaminobutyrate decarboxylase1e-47191
UCMB5137:3857960:3888496388849638899381443Bacillus atrophaeus UCMB-5137decarboxylase, pyridoxal-dependent2e-47190
NC_015957:8103472:8114724811472481161511428Streptomyces violaceusniger Tu 4113 chromosome, complete genomepyridoxal-dependent decarboxylase7e-47188
NC_013440:1698047:1718903171890317203451443Haliangium ochraceum DSM 14365, complete genomePyridoxal-dependent decarboxylase3e-46186
NC_006510:1731939:1741899174189917433441446Geobacillus kaustophilus HTA426, complete genomediaminobutyrate-2-oxoglutarate transaminase8e-44178
NC_009943:940835:9639109639109656311722Candidatus Desulfococcus oleovorans Hxd3, complete genomePyridoxal-dependent decarboxylase2e-42173
NC_016582:9422650:9431646943164694330611416Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative amino acid decarboxylase2e-41170
NC_002939:1866651:1870600187060018722581659Geobacter sulfurreducens PCA, complete genomegroup II decarboxylase1e-38161
NC_008609:975867:9806359806359823381704Pelobacter propionicus DSM 2379, complete genomePyridoxal-dependent decarboxylase1e-38161
NC_010511:2163570:2184008218400821854381431Methylobacterium sp. 4-46 chromosome, complete genomearomatic-L-amino-acid decarboxylase7e-36152
NC_009901:3317068:3318677331867733203231647Shewanella pealeana ATCC 700345, complete genomePyridoxal-dependent decarboxylase4e-35149
NC_015064:2421034:2444891244489124478392949Acidobacterium sp. MP5ACTX9 chromosome, complete genomePyridoxal-dependent decarboxylase4e-34146
NC_014228:1929665:1929665192966519313531689Xenorhabdus nematophila ATCC 19061, complete genomePyridoxal-dependent decarboxylase1e-31137
NC_005125:2811986:2832026283202628335101485Gloeobacter violaceus PCC 7421, complete genomeprobable amino acid decarboxylase6e-30132
NC_003911:3864852:3895885389588538972941410Silicibacter pomeroyi DSS-3, complete genomedecarboxylase, pyridoxal-dependent8e-30132
NC_007484:3358000:3375359337535933768491491Nitrosococcus oceani ATCC 19707, complete genomeAromatic-L-amino-acid decarboxylase3e-28126
NC_016631:1329702:1331786133178613333331548Granulicella mallensis MP5ACTX8 chromosome, complete genomediaminobutyrate decarboxylase1e-27124
NC_014315:3207684:3225648322564832270151368Nitrosococcus watsoni C-113 chromosome, complete genomepyridoxal-dependent decarboxylase3e-27123
NC_009697:275919:2777372777372791611425Clostridium botulinum A str. ATCC 19397 chromosome, completeamino acid decarboxylase4e-25116
NC_009495:280000:2847372847372861611425Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeamino acid decarboxylase7e-25115
NC_013510:2937530:2939368293936829407501383Thermomonospora curvata DSM 43183, complete genomePyridoxal-dependent decarboxylase1e-24114
NC_015656:5084767:5105051510505151064361386Frankia symbiont of Datisca glomerata chromosome, complete genomeDiaminobutyrate decarboxylase3e-23110
NC_007759:2146254:2151267215126721529851719Syntrophus aciditrophicus SB, complete genomeglutamate decarboxylase2e-22107
NC_016584:4961688:4961688496168849631481461Desulfosporosinus orientis DSM 765 chromosome, complete genomePLP-dependent enzyme, glutamate decarboxylase5e-22106
NC_017955:1667500:1683990168399016854111422Modestobacter marinus, complete genomeamino acid decarboxylase1e-21105
NC_016641:5729308:5733271573327157346771407Paenibacillus terrae HPL-003 chromosome, complete genomepyridoxal-dependent decarboxylase2e-21104
NC_007963:814148:8365708365708380391470Chromohalobacter salexigens DSM 3043, complete genomePyridoxal-dependent decarboxylase5e-21102
NC_014623:8798820:8821952882195288234661515Stigmatella aurantiaca DW4/3-1 chromosome, complete genomearomatic-l-amino-acid decarboxylase7e-21102
NC_013757:1212308:1233519123351912349671449Geodermatophilus obscurus DSM 43160, complete genomePyridoxal-dependent decarboxylase1e-20101
NC_016582:10137951:1015568010155680101571191440Streptomyces bingchenggensis BCW-1 chromosome, complete genomearomatic-L-amino-acid decarboxylase1e-20101
NC_013730:58840:7377073770751671398Spirosoma linguale DSM 74, complete genomePyridoxal-dependent decarboxylase2e-20100
NC_014391:3445672:3467503346750334688941392Micromonospora aurantiaca ATCC 27029 chromosome, complete genomepyridoxal-dependent decarboxylase1e-1585.1
NC_013849:1396051:1399365139936514004561092Ferroglobus placidus DSM 10642 chromosome, complete genomePyridoxal-dependent decarboxylase3e-1170.5
NC_003413:1107965:1107965110796511090801116Pyrococcus furiosus DSM 3638, complete genomegroup II decarboxylase6e-1169.3
NC_000868:1168819:1169643116964311707971155Pyrococcus abyssi GE5, complete genomegroup ii decarboxylase1e-0965.1
NC_002678:5020000:5027871502787150289801110Mesorhizobium loti MAFF303099, complete genomehistidine decarboxylase3e-0963.5
NC_012804:2017531:2022388202238820235391152Thermococcus gammatolerans EJ3, complete genomeL-tyrosine decarboxylase (mfnA)4e-0963.2
NC_011529:1554500:1575839157583915769901152Thermococcus onnurineus NA1, complete genomeglutamate decarboxylase4e-0963.2
NC_000961:828416:8464348464348475851152Pyrococcus horikoshii OT3, complete genomehypothetical protein5e-0963.2
NC_016051:1429800:1431252143125214324061155Thermococcus sp. AM4 chromosome, complete genomeL-tyrosine decarboxylase2e-0861.2
NC_016885:1732257:1741246174124617425921347Pyrobaculum oguniense TE7 chromosome, complete genomeglutamate decarboxylase-related PLP-dependent protein2e-0860.8
NC_003901:1568000:1568868156886815700641197Methanosarcina mazei Go1, complete genomeL-tyrosine decarboxylase2e-0757.4
NC_008095:6253610:6264351626435162665192169Myxococcus xanthus DK 1622, complete genomegroup II decarboxylase family protein8e-0755.5