Pre_GI: BLASTP Hits

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Query: NC_012917:1923059:1942048 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1942048, End: 1942707, Length: 660

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:3158353:316756131675613168226666Clostridium clariflavum DSM 19732 chromosome, complete genomeABC-type metal ion transport system permease2e-35149
NC_010321:1361748:136737713673771368030654Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completebinding-protein-dependent transport system inner membrane protein1e-24112
NC_010320:1769486:177396917739691774622654Thermoanaerobacter sp. X514 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein1e-24112
NC_014964:1353939:135956813595681360221654Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completebinding-protein-dependent transport systems inner membrane component1e-24112
NC_014538:1125000:113976011397601140413654Thermoanaerobacter sp. X513 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-24112
NC_019978:2293327:231436623143662315037672Halobacteroides halobius DSM 5150, complete genomeABC-type metal ion transport system, permease component5e-24110
NC_014209:1363151:136980713698071370460654Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,binding-protein-dependent transport systems inner membrane component1e-22106
NC_013921:1344000:134976213497621350415654Thermoanaerobacter italicus Ab9 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-22105
NC_015275:4577642:459101945910194591675657Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, integral membrane subunit2e-22105
NC_015958:1465631:147187814718781472531654Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeABC transporter integral membrane subunit6e-22104
NC_005085:2457295:248359724835972484283687Chromobacterium violaceum ATCC 12472, complete genomeprobable transmembrane ABC transporter protein2e-21102
NC_015856:4342500:436588043658804366533654Collimonas fungivorans Ter331 chromosome, complete genomemethionine ABC transporter permease4e-21101
NC_010184:4763932:477915447791544779819666Bacillus weihenstephanensis KBAB4, complete genomebinding-protein-dependent transport systems inner membrane component3e-2098.6
NC_018704:2417902:243621924362192436881663Amphibacillus xylanus NBRC 15112, complete genomemethionine ABC transporter permease protein3e-2098.2
NC_011772:4875893:489090348909034891568666Bacillus cereus G9842, complete genomeABC transporter, permease protein6e-2097.4
NC_011969:4655602:467204946720494672714666Bacillus cereus Q1 chromosome, complete genomeABC transporter permease1e-1996.7
NC_011963:1482042:148487114848711485491621Rhodobacter sphaeroides KD131 chromosome 1, complete sequencebinding-protein-dependent transport system inner membrane protein2e-1995.5
NC_013714:796442:799570799570800229660Bifidobacterium dentium Bd1, complete genomePermease protein of ABC transporter system3e-1995.1
NC_009633:947695:967236967236967886651Alkaliphilus metalliredigens QYMF chromosome, complete genomebinding-protein-dependent transport system inner membrane protein7e-1994
NC_003450:627500:648437648437649114678Corynebacterium glutamicum ATCC 13032, complete genomeABC-type transporter, permease component9e-1993.6
NC_006958:628035:649898649898650575678Corynebacterium glutamicum ATCC 13032, complete genomeABC transporter, transmembrane component9e-1993.6
NC_013169:1759900:175925017592501759903654Kytococcus sedentarius DSM 20547, complete genomeABC-type metal ion transport system, permease component9e-1993.6
NC_012814:1465738:146508214650821465741660Bifidobacterium animalis subsp. lactis Bl-04, complete genomeABC-type metal ion transport system, permease component1e-1893.2
NC_012815:1465670:146501414650141465673660Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeABC-type metal ion transport system, permease component1e-1893.2
NC_005090:1812833:184033618403361840986651Wolinella succinogenes DSM 1740, complete genomeABC TRANSPORTER PERMEASE COMPONENT4e-1891.3
NC_012121:2218500:222297722229772223636660Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative ABC transporter permease protein6e-1890.9
NC_014168:56728:787757877579467693Segniliparus rotundus DSM 44985 chromosome, complete genomebinding-protein-dependent transporter inner membrane component7e-1890.5
NC_020063:2785652:280777028077702808435666Enterobacteriaceae bacterium strain FGI 57, complete genomeABC-type metal ion transport system, permease component8e-1890.5
NC_015169:1:105210521711660Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequenceABC-type transporter, integral membrane subunit1e-1790.1
NC_016786:533537:533537533537534214678Corynebacterium diphtheriae HC01 chromosome, complete genomeD-methionine transport system permease1e-1789.7
NC_014837:2758239:275760227576022758258657Pantoea sp. At-9b chromosome, complete genomebinding-protein-dependent transporter inner membrane component2e-1789.4
NC_016779:312500:324028324028324693666Bacillus cereus F837/76 chromosome, complete genomemethionine ABC transporter permease3e-1788.2
NC_016783:537717:537717537717538394678Corynebacterium diphtheriae INCA 402 chromosome, complete genomeD-methionine transport system permease protein3e-1788.6
NC_017200:345502:356168356168356833666Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ABC transporter permease3e-1788.6
NC_017150:2290681:229002622900262290700675Acetobacter pasteurianus IFO 3283-01-42C, complete genomeD-methionine transporter permease protein4e-1788.2
NC_017146:2383509:238350923835092384183675Acetobacter pasteurianus IFO 3283-26, complete genomeD-methionine transporter permease protein4e-1788.2
NC_017125:2383467:238346723834672384141675Acetobacter pasteurianus IFO 3283-22, complete genomeD-methionine transporter permease protein4e-1788.2
NC_017100:2383487:238348723834872384161675Acetobacter pasteurianus IFO 3283-03, complete genomeD-methionine transporter permease protein4e-1788.2
NC_014817:1063173:108460410846041085275672Asticcacaulis excentricus CB 48 chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component5e-1787.8
NC_018664:2279687:228646322864632287131669Clostridium acidurici 9a chromosome, complete genomeD-methionine ABC transporter permease protein MetI6e-1787.4
NC_014171:343834:343834343834344499666Bacillus thuringiensis BMB171 chromosome, complete genomeABC transporter permease3e-1685.5
NC_011725:334000:335200335200335802603Bacillus cereus B4264 chromosome, complete genomeABC transporter permease4e-1684.7
NC_011999:558057:578639578639579334696Macrococcus caseolyticus JCSC5402, complete genomeABC transporter, permease protein5e-1684.3
NC_008601:1151653:1168330116833011698021473Francisella tularensis subsp. novicida U112, complete genomemethionine uptake transporter (MUT) family protein, membrane and periplasmic protein5e-1684.3
NC_012803:1117875:113474511347451135425681Micrococcus luteus NCTC 2665, complete genomeABC-type metal ion transport system, permease component6e-1684.3
NC_020211:4168189:418199841819984182651654Serratia marcescens WW4, complete genomeD-methionine transport system permease6e-1684.3
NC_014328:680085:694368694368695021654Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ABC transporter permease7e-1684
NC_015152:3100312:310611731061173106779663Spirochaeta sp. Buddy chromosome, complete genomeABC transporter inner membrane protein1e-1583.2
NC_015566:4205854:422014942201494220802654Serratia sp. AS12 chromosome, complete genomeABC transporter integral membrane protein3e-1581.6
NC_009832:4136878:415124041512404151893654Serratia proteamaculans 568, complete genomebinding-protein-dependent transport systems inner membrane component4e-1581.6
NC_012779:610509:619788619788620387600Edwardsiella ictaluri 93-146, complete genomeD-methionine transport system permease protein MetI8e-1580.5
NC_019908:748635:755374755374756054681Brachyspira pilosicoli P43/6/78 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein4e-1478.2
NC_014330:2457731:248467124846712485315645Brachyspira pilosicoli 95/1000 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-1478.2
NC_010102:283364:287274287274287912639Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-1477.8
NC_004631:283289:284666284666285304639Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative ABC transporter permease protein6e-1477.4
NC_015437:2331082:234628123462812346934654Selenomonas sputigena ATCC 35185 chromosome, complete genomeABC-type transporter, integral membrane subunit1e-1273.2
NC_012658:1617902:163198616319861632642657Clostridium botulinum Ba4 str. 657 chromosome, complete genomemethionine ABC transporter permease4e-1168.2
NC_013714:796442:808226808226808792567Bifidobacterium dentium Bd1, complete genomePermease protein of ABC transporter system6e-1167.8
NC_017316:2581781:260111526011152601786672Enterococcus faecalis OG1RF chromosome, complete genomemetal ion ABC superfamily ATP binding cassette transporter, membrane protein1e-1066.6
NC_004668:3053119:307141930714193072090672Enterococcus faecalis V583, complete genomeABC transporter, permease protein1e-1066.6
NC_015660:3467579:349402434940243494674651Geobacillus thermoglucosidasius C56-YS93 chromosome, completeABC transporter integral membrane protein2e-1066.2
NC_009480:2580429:258136325813632582022660Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative metal ABC transporter , permease component6e-1064.3
NC_015978:113656:128798128798129502705Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeD-methionine transport system permease metI4e-0961.6
NC_009077:874164:879519879519880136618Mycobacterium sp. JLS, complete genomebinding-protein-dependent transport systems inner membrane component1e-0860.1