Pre_GI: BLASTP Hits

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Query: NC_012917:1923059:1940112 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1940112, End: 1940957, Length: 846

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017316:2581781:260028426002842601102819Enterococcus faecalis OG1RF chromosome, complete genomeABC superfamily ATP binding cassette transporter, binding protein5e-1478.6
NC_017341:903473:903473903473904294822Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ABC superfamily ATP binding cassette transporter, binding protein2e-29129
NC_014246:676570:696807696807697637831Mobiluncus curtisii ATCC 43063 chromosome, complete genomeABC transporter ATP-binding protein3e-30132
NC_018664:2279687:228558422855842286438855Clostridium acidurici 9a chromosome, complete genomeABC transporter D-methionine-binding protein MetQ2e-28126
NC_006177:280234:280234280234281076843Symbiobacterium thermophilum IAM 14863, complete genomeABC transporter substrate-binding protein2e-36152
NC_011725:334000:335824335824336678855Bacillus cereus B4264 chromosome, complete genomeABC transporter substrate-binding protein4e-29128
NC_014171:343834:344521344521345375855Bacillus thuringiensis BMB171 chromosome, complete genomeABC transporter substrate-binding protein4e-29128
NC_011969:4655602:467033346703334671139807Bacillus cereus Q1 chromosome, complete genomeABC transporter substrate-binding protein2e-30132
NC_011969:4655602:467121246712124671937726Bacillus cereus Q1 chromosome, complete genomeABC transporter substrate-binding protein2e-31135
NC_017200:345502:356855356855357709855Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ABC transporter substrate-binding protein4e-29128
NC_011999:558057:579398579398580222825Macrococcus caseolyticus JCSC5402, complete genomeABC transporter, substrate-binding protein2e-27122
NC_016627:3158353:316928931692893170164876Clostridium clariflavum DSM 19732 chromosome, complete genomeABC-type metal ion transport system, periplasmic component/surface antigen3e-84311
NC_019978:2293327:231351523135152314324810Halobacteroides halobius DSM 5150, complete genomeABC-type metal ion transport system, periplasmic component/surface antigen2e-42172
NC_020063:2785652:280697428069742807747774Enterobacteriaceae bacterium strain FGI 57, complete genomeABC-type metal ion transport system, periplasmic component/surface antigen2e-30133
NC_006958:628035:651850651850652749900Corynebacterium glutamicum ATCC 13032, complete genomeABC-type transport system, secreted lipoprotein component4e-1272.4
NC_003450:627500:650389650389651288900Corynebacterium glutamicum ATCC 13032, complete genomeABC-type transporter, periplasmic component4e-1272.4
NC_008313:886248:886248886248887045798Ralstonia eutropha H16 chromosome 1, complete sequenceABC-type transporter, periplasmic component: MUTfamily6e-37154
NC_011751:4293966:429975942997594300577819Escherichia coli UMN026 chromosome, complete genomecytoplasmic membrane lipoprotein-282e-23109
NC_015663:1356982:138870113887011389510810Enterobacter aerogenes KCTC 2190 chromosome, complete genomecytoplasmic membrane lipoprotein-284e-23108
NC_013008:4643825:468465446846544685472819Escherichia coli O157:H7 str. TW14359 chromosome, complete genomecytoplasmic membrane lipoprotein-286e-24111
NC_011750:4390000:441798044179804418798819Escherichia coli IAI39 chromosome, complete genomecytoplasmic membrane lipoprotein-281e-22107
CP002185:4035502:406133340613334062151819Escherichia coli W, complete genomecytoplasmic membrane lipoprotein-283e-23109
NC_012947:44512:445124451245330819Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecytoplasmic membrane lipoprotein-281e-22107
NC_020211:4168189:418269141826914183506816Serratia marcescens WW4, complete genomeD-methionine transport system substrate-binding protein1e-29130
NC_017125:2383467:238510223851022385914813Acetobacter pasteurianus IFO 3283-22, complete genomeD-methionine transporter substrate-binding periplasmic protein3e-2099
NC_017146:2383509:238514423851442385956813Acetobacter pasteurianus IFO 3283-26, complete genomeD-methionine transporter substrate-binding periplasmic protein3e-2099
NC_017150:2290681:229166122916612292473813Acetobacter pasteurianus IFO 3283-01-42C, complete genomeD-methionine transporter substrate-binding periplasmic protein3e-2099
NC_017100:2383487:238512223851222385934813Acetobacter pasteurianus IFO 3283-03, complete genomeD-methionine transporter substrate-binding periplasmic protein3e-2099
NC_016786:533537:535271535271536143873Corynebacterium diphtheriae HC01 chromosome, complete genomeD-methionine-binding lipoprotein1e-1273.9
NC_016783:537717:539451539451540323873Corynebacterium diphtheriae INCA 402 chromosome, complete genomeD-methionine-binding lipoprotein7e-1374.7
NC_016786:533537:536317536317537189873Corynebacterium diphtheriae HC01 chromosome, complete genomeD-methionine-binding lipoprotein3e-1479.3
NC_016783:537717:540497540497541369873Corynebacterium diphtheriae INCA 402 chromosome, complete genomeD-methionine-binding lipoprotein1e-1480.1
NC_008835:2133696:215126821512682152077810Burkholderia mallei NCTC 10229 chromosome I, complete sequenceD-methionine-binding lipoprotein metQ3e-33142
NC_006349:1630514:163448816344881635297810Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceD-methionine-binding lipoprotein metQ3e-33142
NC_009079:705931:723507723507724307801Burkholderia mallei NCTC 10247 chromosome I, complete sequenceD-methionine-binding lipoprotein metQ6e-33141
NC_013961:441719:474225474225475028804Erwinia amylovora, complete genomeD-methionine-binding lipoprotein metQ precursor2e-23109
NC_010102:283364:286420286420287235816Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-30133
NC_011353:4688000:472861347286134729431819Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein6e-24111
NC_009792:4693152:470704247070424707947906Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-23110
NC_007168:454000:475473475473476288816Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-26119
NC_011601:4096427:413928141392814140099819Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-23109
NC_012121:2218500:222210822221082222953846Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein, similar to lactococcal lipoprotein4e-25115
NC_016818:1291665:129865212986521299470819Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completelipoprotein3e-21102
NC_008027:5576458:557910055791005579885786Pseudomonas entomophila L48, complete genomelipoprotein7e-35147
NC_014618:57707:587275872759545819Enterobacter cloacae SCF1 chromosome, complete genomelipoprotein4e-21102
NC_012214:474359:490940490940491755816Erwinia pyrifoliae Ep1/96, complete genomeLipoprotein 282e-24112
NC_013941:4470932:451300245130024513820819Escherichia coli O55:H7 str. CB9615 chromosome, complete genomelipoprotein 28 precursor5e-24111
NC_010498:4072681:409553340955334096351819Escherichia coli SMS-3-5, complete genomelipoprotein NlpA3e-23108
NC_007643:889755:930140930140930946807Rhodospirillum rubrum ATCC 11170, complete genomeLipoprotein YaeC7e-28124
NC_004578:5916711:593811559381155938897783Pseudomonas syringae pv. tomato str. DC3000, complete genomelipoprotein, NLPA family3e-31135
NC_015958:1465631:147255914725591473383825Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomelipoprotein, YaeC family1e-40167
NC_012779:610509:618910618910619725816Edwardsiella ictaluri 93-146, complete genomelipoprotein, YaeC family5e-29128
NC_009832:4136878:415195341519534152768816Serratia proteamaculans 568, complete genomelipoprotein, YaeC family2e-28125
NC_012803:1117875:113547911354791136342864Micrococcus luteus NCTC 2665, complete genomelipoprotein, YaeC family1e-1996.7
NC_004668:3053119:307058830705883071406819Enterococcus faecalis V583, complete genomelipoprotein, YaeC family5e-1478.6
NC_011963:1482042:148552014855201486296777Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceLipoprotein, YaeC family9e-41167
NC_010682:3745000:376398537639853764791807Ralstonia pickettii 12J chromosome 1, complete sequencelipoprotein, YaeC family4e-32138
NC_015061:1251905:125985512598551260673819Rahnella sp. Y9602 chromosome, complete genomelipoprotein, YaeC family6e-21101
NC_014209:1363151:137048813704881371312825Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,lipoprotein, YaeC family2e-40166
NC_014538:1125000:113889111388911139727837Thermoanaerobacter sp. X513 chromosome, complete genomelipoprotein, YaeC family1e-39163
NC_015437:2331082:234540623454062346206801Selenomonas sputigena ATCC 35185 chromosome, complete genomelipoprotein, YaeC family2e-35149
NC_002655:4653160:469449246944924695310819Escherichia coli O157:H7 EDL933, complete genomelipoprotein-286e-24111
NC_013971:3296272:329627232962723297075804Erwinia amylovora ATCC 49946 chromosome, complete genomelipoprotein-282e-23109
NC_002695:4584177:462550946255094626327819Escherichia coli O157:H7 str. Sakai, complete genomelipoprotein-286e-24111
NC_017162:1228723:123065512306551231530876Acinetobacter baumannii 1656-2 chromosome, complete genomemetal ion ABC transporter substrate-binding protein/surface antigen9e-24110
NC_018704:2417902:243531824353182436190873Amphibacillus xylanus NBRC 15112, complete genomemethionine ABC transporter methionine-binding protein2e-28126
NC_020418:14965:194871948720290804Morganella morganii subsp. morganii KT, complete genomeMethionine ABC transporter substrate-binding protein2e-25115
NC_016779:312500:324715324715325569855Bacillus cereus F837/76 chromosome, complete genomemethionine ABC transporter substrate-binding protein4e-29128
NC_015856:4342500:436657943665794367409831Collimonas fungivorans Ter331 chromosome, complete genomemethionine ABC transporter substrate-binding protein9e-34144
NC_008601:1151653:1168330116833011698021473Francisella tularensis subsp. novicida U112, complete genomemethionine uptake transporter (MUT) family protein, membrane and periplasmic protein4e-25115
NC_012658:1617902:163281216328121633630819Clostridium botulinum Ba4 str. 657 chromosome, complete genomeNLPA family lipoprotein3e-1685.9
NC_011595:2616861:263751726375172638398882Acinetobacter baumannii AB307-0294, complete genomeNLPA lipofamily protein9e-25114
NC_012815:1465670:146690614669061467802897Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeNLPA lipoprotein8e-51200
NC_013921:1344000:135044313504431351267825Thermoanaerobacter italicus Ab9 chromosome, complete genomeNLPA lipoprotein2e-40166
NC_009633:947695:966401966401967231831Alkaliphilus metalliredigens QYMF chromosome, complete genomeNLPA lipoprotein1e-34147
NC_010184:4763932:477831947783194779131813Bacillus weihenstephanensis KBAB4, complete genomeNLPA lipoprotein8e-32137
NC_014817:1063173:108379410837941084591798Asticcacaulis excentricus CB 48 chromosome 2, complete sequencenlpa lipoprotein3e-31135
NC_015169:1:273627363677942Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequenceNLPA lipoprotein1e-29130
NC_015660:3467579:349314534931453493996852Geobacillus thermoglucosidasius C56-YS93 chromosome, completeNLPA lipoprotein1e-28127
NC_015660:3467579:349571134957113496574864Geobacillus thermoglucosidasius C56-YS93 chromosome, completeNLPA lipoprotein2e-28125
NC_012814:1465738:146697414669741467870897Bifidobacterium animalis subsp. lactis Bl-04, complete genomeNLPA lipoprotein8e-51200
NC_010184:4763932:477744147774414778247807Bacillus weihenstephanensis KBAB4, complete genomeNLPA lipoprotein3e-31135
NC_014168:56728:805198051981463945Segniliparus rotundus DSM 44985 chromosome, complete genomeNLPA lipoprotein3e-21102
NC_012880:3982383:400709040070904007911822Dickeya dadantii Ech703, complete genomeNLPA lipoprotein9e-88323
NC_015169:1:176017602689930Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequenceNLPA lipoprotein3e-37155
NC_013714:796442:797511797511798377867Bifidobacterium dentium Bd1, complete genomeNLPA lipoprotein8e-54210
NC_015152:3100312:310526031052603106066807Spirochaeta sp. Buddy chromosome, complete genomeNLPA lipoprotein7e-31134
NC_014839:253961:257277257277258116840Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceNLPA lipoprotein1e-26120
NC_009077:874164:878629878629879522894Mycobacterium sp. JLS, complete genomeNLPA lipoprotein7e-1477.8
NC_015275:4577642:459007445900744590964891Clostridium lentocellum DSM 5427 chromosome, complete genomeNLPA lipoprotein1e-69263
NC_014330:2457731:248638124863812487190810Brachyspira pilosicoli 95/1000 chromosome, complete genomeouter membrane lipoprotein1e-20100
NC_019908:748635:752635752635753450816Brachyspira pilosicoli P43/6/78 chromosome, complete genomeouter membrane lipoprotein4e-23108
NC_019908:748635:753499753499754308810Brachyspira pilosicoli P43/6/78 chromosome, complete genomeouter membrane lipoprotein1e-20100
NC_014328:680085:695044695044695883840Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ABC transporter periplasmic protein1e-34147
NC_004603:370320:379675379675380478804Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative ABC transporter substrate binding protein7e-26117
NC_016052:82358:105453105453106304852Tetragenococcus halophilus NBRC 12172, complete genomeputative ABC transporter substrate-binding protein2e-23110
NC_011772:4875893:489006748900674890879813Bacillus cereus G9842, complete genomeputative ABC transporter, substrate-binding protein6e-32137
NC_011772:4875893:488918948891894889995807Bacillus cereus G9842, complete genomeputative ABC transporter, substrate-binding protein7e-31134
NC_004631:283289:283812283812284627816Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative lipoprotein precursor1e-30133
NC_009480:2580429:258305825830582583990933Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative metal ABC transporter, substrate-binding protein5e-1375.1
NC_013714:796442:808835808835809701867Bifidobacterium dentium Bd1, complete genomeSolute-binding protein of ABC transporter system8e-2097.4
NC_014964:1353939:136025413602541361090837Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeYaeC family lipoprotein1e-39163
NC_009255:351695:368989368989369795807Burkholderia vietnamiensis G4 chromosome 2, complete sequenceYaeC family lipoprotein4e-33141
NC_010320:1769486:177465517746551775491837Thermoanaerobacter sp. X514 chromosome, complete genomeYaeC family lipoprotein1e-39163
NC_015563:4414854:442954344295434430328786Delftia sp. Cs1-4 chromosome, complete genomeYaeC family lipoprotein2e-27122
NC_010321:1361748:136806313680631368899837Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeYaeC family lipoprotein1e-39163
NC_015566:4205854:422086342208634221678816Serratia sp. AS12 chromosome, complete genomeYaeC family lipoprotein3e-28125
NC_012891:1277966:128024112802411281080840Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,YaeC family protein7e-21101