Pre_GI: BLASTP Hits

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Query: NC_012917:1923059:1931694 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1931694, End: 1933502, Length: 1809

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014169:2234249:2242641224264122456763036Bifidobacterium longum subsp. longum JDM301 chromosome, completefamily 8 glycosyl transferase1e-0758.9
NC_012917:1923059:1933585193358519354321848Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeglycosyl transferase family 81e-155550
NC_012917:1923059:1935634193563419374661833Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeglycosyl transferase family 82e-163576
NC_009348:161244:167533167533168498966Aeromonas salmonicida subsp. salmonicida A449, complete genomeglycosyl transferase family protein6e-0756.2
NC_008570:4594436:4620296462029646213961101Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeglycosyl transferase, family 82e-0758.2
NC_008312:1725763:172689217268921727728837Trichodesmium erythraeum IMS101, complete genomeglycosyl transferase, family 82e-1171.2
NC_009792:4658909:466842146684214669365945Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0552.4
NC_015873:1901939:1911007191100719120141008Megasphaera elsdenii DSM 20460, complete genomelipopolysaccharide 15e-1066.6
NC_009952:3596399:3608567360856736095951029Dinoroseobacter shibae DFL 12, complete genomelipopolysaccharide 16e-0963.2
NC_007613:3637832:364871236487123649707996Shigella boydii Sb227, complete genomelipopolysaccharide 1,2-glucosyltransferase5e-0653.1
NC_007384:3956465:396377339637733964768996Shigella sonnei Ss046, complete genomelipopolysaccharide 1,2-glucosyltransferase3e-0654.3
NC_016822:4093000:410063341006334101628996Shigella sonnei 53G, complete genomelipopolysaccharide 1,2-glucosyltransferase3e-0654.3
NC_010658:3774110:378593637859363786931996Shigella boydii CDC 3083-94, complete genomelipopolysaccharide 1,2-glucosyltransferase5e-0653.1
NC_009801:4108179:411905041190504120045996Escherichia coli E24377A, complete genomelipopolysaccharide 1,2-glucosyltransferase5e-0653.1
NC_011958:735755:777563777563778477915Rhodobacter sphaeroides KD131 chromosome 2, complete genomeLipopolysaccharide 3-alpha-galactosyltransferase1e-0861.6
NC_016902:88500:960959609597090996Escherichia coli KO11FL chromosome, complete genomeLipopolysaccharide glucosyltransferase I5e-0653.1
CP002516:88500:960959609597090996Escherichia coli KO11, complete genomeLipopolysaccharide glucosyltransferase I5e-0653.1
NC_016109:3875617:389617138961713897049879Kitasatospora setae KM-6054, complete genomeputative glycosyltransferase5e-1376.6
NC_006347:5027580:5030799503079950321481350Bacteroides fragilis YCH46, complete genomeputative glycosyltransferase2e-0861.2
NC_011601:4036590:4047357404735740483731017Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeUDP-D-glucose: (galactosyl) lipopolysaccharide glucosyltransferase1e-0862.4
AC_000091:3827856:3838416383841638394321017Escherichia coli W3110 DNA, complete genomeUDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase1e-0862
NC_011740:4007000:4016505401650540175211017Escherichia fergusonii ATCC 35469, complete genomeUDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase2e-1068.2
NC_012759:3675396:3687332368733236883481017Escherichia coli BW2952 chromosome, complete genomeUDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase1e-0862
NC_000913:3786124:3799006379900638000221017Escherichia coli K12, complete genomeUDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase1e-0862
NC_010473:3883701:3896583389658338975991017Escherichia coli str. K-12 substr. DH10B, complete genomeUDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase1e-0862
NC_011741:3862935:3872053387205338730781026Escherichia coli IAI1 chromosome, complete genomeUDP-galactose:(Galactosyl) LPS alpha1, 2-galactosyltransferase2e-0654.7
CU928160:3862935:3872053387205338730781026Escherichia coli IAI1 chromosome, complete genomeUDP-galactose:(Galactosyl) LPS alpha1, 2-galactosyltransferase2e-0654.7
CP002185:3998112:400898340089834009978996Escherichia coli W, complete genomeUDP-galactose:(glucosyl) LPS a1,2-galactosyltransferase5e-0653.1
NC_013716:4408201:4418866441886644198821017Citrobacter rodentium ICC168, complete genomeUDP-glucose:(galactosyl) LPS alpha-1,2-glucosyltransferase5e-1170.1