Pre_GI: BLASTP Hits

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Query: NC_012917:1923059:1925867 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1925867, End: 1927054, Length: 1188

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006155:1807902:1827400182740018285751176Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-105383
NC_010634:1809500:1827618182761818287841167Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-105383
NC_009708:2788855:2788855278885527900211167Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-105382
NC_003143:1691000:1709391170939117105571167Yersinia pestis CO92, complete genomehypothetical protein1e-104380
NC_008149:2773139:2773139277313927743051167Yersinia pestis Nepal516, complete genomehypothetical protein1e-104380
NC_005810:1520000:1538295153829515394611167Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-104380
NC_008150:905000:9232559232559244211167Yersinia pestis Antiqua, complete genomehypothetical protein1e-104380
NC_009381:1655731:1655731165573116568971167Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-104380
NC_014029:1760948:1783896178389617850621167Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-104380
NC_017154:1707500:1725989172598917271551167Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-104380
NC_017160:2054289:2054289205428920554551167Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-104380
NC_017168:3948514:3948514394851439496801167Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-104380
NC_017265:2557476:2557476255747625586421167Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-104380
NC_004088:2937077:2937077293707729382521176Yersinia pestis KIM, complete genomehypothetical protein7e-105380
NC_010159:3169266:3185158318515831863241167Yersinia pestis Angola, complete genomehypothetical protein9e-104377
NC_008800:3061484:3061484306148430626501167Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein7e-101367
NC_015224:1703130:1722495172249517236611167Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-100366
NC_019964:3028469:3063294306329430646431350Halovivax ruber XH-70, complete genomehypothetical protein1e-24114
NC_020388:1100759:1143857114385711450771221Natronomonas moolapensis 8.8.11 complete genomehypothetical protein7e-23108
NC_013730:2490000:2495667249566724968811215Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF4183e-1790.1
NC_005957:4850659:485439848543984855336939Bacillus thuringiensis serovar konkukian str. 97-27, completeconserved hypothetical protein, possible transmembrane protein4e-1376.3
NC_014655:2581968:2580846258084625819791134Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein1e-1274.3
NC_020126:4622371:4629325462932546305781254Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-1273.2
NC_000964:2702376:2704624270462427058411218Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-0861.6
NC_017030:8599515:8599515859951586008431329Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein1e-0860.8
NC_020410:2509057:2529147252914725303641218Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative integral inner membrane protein3e-0860.1
NC_009848:161373:1690661690661701931128Bacillus pumilus SAFR-032, complete genomehypothetical protein2e-0757.4
NC_014816:2357000:2368807236880723700271221Asticcacaulis excentricus CB 48 chromosome 1, complete sequencehypothetical protein3e-0756.6
NC_016792:143614:1640161640161651611146Bacillus cereus NC7401 plasmid pNCcld, complete sequencehypothetical protein2e-0653.9
NC_011655:88336:1087381087381098831146Bacillus cereus AH187 plasmid pAH187_270, complete sequencehypothetical protein2e-0653.9
NC_019896:1483073:1519937151993715211541218Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein4e-0652.8
NC_020244:2509000:2509199250919925104161218Bacillus subtilis XF-1, complete genomeputative integral inner membrane protein4e-0652.8