Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1889592 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1889592, End: 1889936, Length: 345

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:660659:684457684457684801345Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-38155
NC_014618:1593360:161315916131591613503345Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein3e-37153
NC_016816:1545354:158094815809481581268321Pantoea ananatis LMG 5342, complete genomehypothetical protein4e-21100