Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1870941 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1870941, End: 1871135, Length: 195

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015224:3291736:330962033096203309811192Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein6e-1889.4
NC_020260:3004500:301225130122513012442192Cronobacter sakazakii Sp291, complete genomeputative repressor3e-1477.4
NC_015663:1356982:137985713798571380051195Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-1271.6
NC_015968:74124:825878258782778192Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein1e-1168.6
NC_002695:1571389:159703415970341597165132Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein8e-0958.9
NC_002655:1655944:168101016810101681141132Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933C8e-0958.9
NC_012917:569856:583171583171583341171Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein; putative repressor (interpro)2e-0651.2
NC_012880:3982383:398845039884503988620171Dickeya dadantii Ech703, complete genomeconserved hypothetical protein; putative repressor (interpro)2e-0650.8
NC_012912:4012112:401806540180654018235171Dickeya zeae Ech1591, complete genomeconserved hypothetical protein; putative repressor (interpro)2e-0650.8
NC_013956:3641368:364742236474223647709288Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein4e-0650.4