Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1865625 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1865625, End: 1867019, Length: 1395

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:3175283:3197101319710131984951395Dickeya dadantii 3937 chromosome, complete genomearylsulfatase regulator0898
NC_014562:2563466:2578549257854925799431395Pantoea vagans C9-1 chromosome, complete genomeCoenzyme PQQ synthesis protein E0728
NC_013941:3300000:3318656331865633200441389Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein0704
NC_011283:4438500:4465399446539944667871389Klebsiella pneumoniae 342 chromosome, complete genomeradical SAM protein0703
NC_009792:3245368:3273338327333832747261389Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein0703
NC_009436:3117661:3134246313424631356341389Enterobacter sp. 638, complete genomeradical SAM protein0687
NC_015556:2265940:2316980231698023184791500Pseudomonas fulva 12-X chromosome, complete genomeRadical SAM domain protein3e-74279
NC_015379:89441:1021301021301035361407Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein8e-70265
NC_016616:2997348:3017645301764530191051461Dechlorosoma suillum PS chromosome, complete genomeHis-Xaa-Ser repeat-associated upstream radical SAM protein3e-69263
NC_016948:2129335:2137171213717121386341464Mycobacterium intracellulare MOTT-64 chromosome, complete genomeradical SAM domain-containing protein6e-67255
NC_014623:7550461:7550461755046175519031443Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein1e-66254
NC_009349:3396:1762117621190751455Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeradical SAM domain-containing protein6e-65248
NC_009615:2503465:2528601252860125300251425Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein2e-61236
NC_009659:1129066:1138477113847711399191443Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein1e-60234
NC_011769:3434744:3445161344516134466241464Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeRadical SAM domain protein2e-58227
NC_014387:2297304:2314241231424123156411401Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeradical SAM domain-containing protein2e-47190
NC_018000:4958637:4967459496745949688681410Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein3e-42173
NC_020291:2040047:2040047204004720414681422Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeCys-rich peptide radical SAM maturase CcpM1e-0758.2
NC_012796:3600630:3639300363930036407181419Desulfovibrio magneticus RS-1, complete genomehypothetical protein3e-0757
NC_014328:3682000:3689705368970536910721368Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Fe-S oxidoreductase4e-0756.6
NC_007492:3384077:3411859341185934132921434Pseudomonas fluorescens PfO-1, complete genomeRadical SAM4e-0756.6
NC_009464:3135468:3140697314069731418481152Uncultured methanogenic archaeon RC-I, complete genomearylsulfatase regulator5e-0756.2
NC_015416:2967511:2978289297828929797761488Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein5e-0756.2
NC_011898:598014:6202596202596216021344Clostridium cellulolyticum H10, complete genomeRadical SAM domain protein8e-0755.5
NC_015064:649201:6555536555536566201068Acidobacterium sp. MP5ACTX9 chromosome, complete genomemolybdenum cofactor biosynthesis protein A1e-0655.1
NC_018870:354164:3541643541643552281065Thermacetogenium phaeum DSM 12270 chromosome, complete genomeradical SAM domain-containing protein1e-0654.7
NC_007681:696252:7141157141157152871173Methanosphaera stadtmanae DSM 3091, complete genomepredicted arylsulfatase regulatory protein2e-0653.9