Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1862702 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1862702, End: 1863139, Length: 438

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:3245368:327774532777453278182438Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-48189
NC_011283:4438500:445597944559794456392414Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein6e-41166
NC_013941:3300000:332635433263543326755402Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-39161
NC_012125:4716000:473015347301534730485333Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-37152
NC_011741:4570498:458912245891224589562441Escherichia coli IAI1 chromosome, complete genomehypothetical protein5e-33139
CU928160:4570498:458912245891224589562441Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein5e-33139
NC_009792:3665369:368216536821653682593429Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-33139
NC_012880:3421500:343043134304313430814384Dickeya dadantii Ech703, complete genomehypothetical protein3e-30130
NC_009436:3117661:313781431378143138128315Enterobacter sp. 638, complete genomehypothetical protein7e-30129
NC_004547:1174650:119471011947101195108399Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein6e-29125
NC_009801:2898426:292365429236542924058405Escherichia coli E24377A, complete genomehypothetical protein1e-28125
NC_013971:73037:869858698587341357Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein3e-28123
NC_008800:1090000:110731611073161107732417Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative ATP/GTP-binding protein2e-26117
NC_010067:191190:208147208147208398252Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-23107
NC_011094:2791719:280775428077542807978225Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-1682.8
NC_013971:73037:891298912989521393Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein8e-1372.4
NC_012559:854507:883086883086883382297Laribacter hongkongensis HLHK9, complete genomeAuxiliary mobilization protein C3e-0857