Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1859873 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1859873, End: 1860247, Length: 375

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:3300000:332900133290013329375375Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein5e-41166
NC_009792:3245368:328040132804013280775375Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-41166
NC_002695:3468873:349122434912243491619396Escherichia coli O157:H7 str. Sakai, complete genomehypothetical lipoprotein5e-37152
NC_013008:3525428:355036235503623550640279Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-27119
NC_011353:3573641:359548735954873595765279Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein5e-27119
NC_002655:3538656:355867035586703558948279Escherichia coli O157:H7 EDL933, complete genomehypothetical protein5e-27119
NC_004547:1873390:190358219035821903959378Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-25113
NC_010067:191190:206088206088206474387Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-25113
NC_009792:3665369:368431136843113684697387Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-24111
NC_011094:2791719:280971128097112810097387Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-24111
NC_012880:3421500:343251534325153432901387Dickeya dadantii Ech703, complete genomehypothetical protein3e-24110
NC_011741:4570498:458703045870304587416387Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-23108
CU928160:4570498:458703045870304587416387Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative exported protein1e-23108
NC_011294:2053991:207485220748522075229378Salmonella enterica subsp. enterica serovar Enteritidis strexported protein1e-23108
NC_009801:2898426:292578929257892926175387Escherichia coli E24377A, complete genomeputative lipoprotein2e-23107
NC_011601:2139188:215561321556132155990378Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein6e-23106
NC_011149:1987291:200946120094612009838378Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-22105
NC_011274:2044000:206598020659802066357378Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-22104
NC_008800:1090000:110474711047471105136390Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative lipoprotein1e-1685.1
NC_017047:1934430:194128519412851941674390Rahnella aquatilis HX2 chromosome, complete genomelipoprotein2e-1580.9
NC_016642:990058:101355610135561013945390Pseudovibrio sp. FO-BEG1 chromosome, complete genomeputative lipoprotein1e-1168.2
NC_015731:313676:337077337077337463387Nitrosomonas sp. Is79A3 chromosome, complete genomelipoprotein2e-1064.7
NC_010645:406794:411924411924412319396Bordetella avium 197N, complete genomehypothetical protein5e-0959.7
NC_004431:2185750:220707222070722207284213Escherichia coli CFT073, complete genomehypothetical protein6e-0959.7
NC_008253:1938975:196026919602691960439171Escherichia coli 536, complete genomehypothetical protein7e-0959.3
NC_013173:1712138:171841517184151718819405Desulfomicrobium baculatum DSM 4028, complete genomelipoprotein3e-0753.9
NC_015731:313676:320474320474320902429Nitrosomonas sp. Is79A3 chromosome, complete genomelipoprotein4e-0753.5
NC_020209:1986503:201798820179882018356369Pseudomonas poae RE*1-1-14, complete genomehypothetical protein9e-0752.4