Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1849112 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1849112, End: 1849981, Length: 870

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1819036:184796518479651848831867Pectobacterium wasabiae WPP163, complete genomehypothetical protein1e-141502
NC_011283:4438500:445377944537794454645867Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-85316
NC_013941:3300000:333677833367783337629852Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-84312
NC_013008:3525428:355800735580073558858852Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-84312
NC_011353:3573641:360328236032823604133852Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-84312
NC_002695:3468873:349904634990463499897852Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-84312
NC_002655:3538656:356633635663363567187852Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-84312
NC_010067:191190:198452198452199297846Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-74278
NC_009792:3665369:369124536912453692090846Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein9e-74276
NC_009801:2898426:293212929321292932983855Escherichia coli E24377A, complete genomehypothetical protein5e-70264
NC_009436:3117661:314648831464883147342855Enterobacter sp. 638, complete genomehypothetical protein3e-69261
NC_006905:4638707:464661946466194647488870Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-67256
NC_016514:3573400:360031736003173601171855Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein5e-67254
NC_012125:4716000:472389247238924724803912Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-67254
NC_008800:1090000:109752010975201098374855Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein7e-67254
NC_016816:1545354:155310715531071553958852Pantoea ananatis LMG 5342, complete genomehypothetical protein6e-63240
NC_011094:2791719:281369328136932814544852Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-62238
NC_011741:4570498:457955145795514580360810Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-21102
CU928160:4570498:457955145795514580360810Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-21102
NC_011149:1987291:201655220165522017397846Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein4e-2099
NC_016831:947281:956178956178957053876Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-2098.6
NC_011294:2053991:208640120864012087276876Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-2098.6
NC_011274:2044000:207752920775292078404876Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-2098.6
NC_011205:2180598:221341622134162214291876Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-2097.8
NC_011601:2139188:214765021476502148525876Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein9e-2097.4
NC_004547:1873390:188881018888101889685876Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-1995.1
NC_008253:1938975:196888519688851969721837Escherichia coli 536, complete genomehypothetical protein2e-1893.2
NC_004431:2185750:221572722157272216620894Escherichia coli CFT073, complete genomehypothetical protein2e-1892.8
NC_013716:2139952:216309721630972163942846Citrobacter rodentium ICC168, complete genomehypothetical protein4e-1892.4
NC_011745:2209288:226570122657012266564864Escherichia coli ED1a chromosome, complete genomehypothetical protein5e-1581.6
NC_016832:948029:956748956748957611864Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-1478.6
NC_004631:948054:956794956794957657864Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-1478.6