Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:1840172:1841436 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1841436, End: 1841951, Length: 516

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:3117639:313469131346913135206516Pectobacterium wasabiae WPP163, complete genomevirulence-related outer membrane protein6e-74276
NC_017047:1434500:145350314535031454036534Rahnella aquatilis HX2 chromosome, complete genomeouter membrane protein X3e-50197
NC_015061:1481500:150056015005601501093534Rahnella sp. Y9602 chromosome, complete genomevirulence-related outer membrane protein3e-50197
NC_013364:928486:930528930528931043516Escherichia coli O111:H- str. 11128, complete genomeouter membrane protein X1e-49195
NC_013353:922937:924979924979925494516Escherichia coli O103:H2 str. 12009, complete genomeouter membrane protein X1e-49195
AP010958:922937:924979924979925494516Escherichia coli O103:H2 str. 12009 DNA, complete genomeouter membrane protein X1e-49195
NC_004088:1851500:185503018550301855560531Yersinia pestis KIM, complete genomeouter membrane protein X7e-45179
NC_008149:2366500:237839423783942378918525Yersinia pestis Nepal516, complete genomeouter membrane protein7e-45179
NC_010159:1818500:183064818306481831172525Yersinia pestis Angola, complete genomeouter membrane protein X7e-45179
NC_005810:2549680:258266425826642583194531Yersinia pestis biovar Microtus str. 91001, complete genomeouter membrane protein X7e-45179
NC_010634:2894631:292779029277902928314525Yersinia pseudotuberculosis PB1/+, complete genomevirulence-related outer membrane protein7e-45179
NC_003143:2804500:281661028166102817134525Yersinia pestis CO92, complete genomeouter membrane protein X7e-45179
NC_006155:2979500:300984830098483010372525Yersinia pseudotuberculosis IP 32953, complete genomeouter membrane protein X7e-45179
NC_009381:2138625:216881821688182169342525Yersinia pestis Pestoides F chromosome, complete genomeouter membrane protein X7e-45179
NC_009708:1735903:174271817427181743242525Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeouter membrane protein X7e-45179
NC_014029:2756500:276893327689332769457525Yersinia pestis Z176003 chromosome, complete genomeouter membrane protein X7e-45179
NC_017154:2804000:281608328160832816607525Yersinia pestis D106004 chromosome, complete genomeouter membrane protein X7e-45179
NC_017160:2787637:279244827924482792972525Yersinia pestis D182038 chromosome, complete genomeouter membrane protein X7e-45179
NC_017168:2941938:294530229453022945826525Yersinia pestis A1122 chromosome, complete genomeouter membrane protein X7e-45179
NC_017265:1571305:157611715761171576641525Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative outer membrane protein7e-45179
NC_015566:4662171:466624646662464666821576Serratia sp. AS12 chromosome, complete genomevirulence-related outer membrane protein1e-24112
NC_015566:4662171:467064046706404671215576Serratia sp. AS12 chromosome, complete genomevirulence-related outer membrane protein2e-24111
NC_004088:2227278:224345322434532243992540Yersinia pestis KIM, complete genomeouter membrane protein X7e-23106
NC_008150:1705152:173918017391801739719540Yersinia pestis Antiqua, complete genomeattachment invasion locus protein precursor7e-23106
NC_010465:2282874:228843322884332288972540Yersinia pseudotuberculosis YPIII, complete genomevirulence-related outer membrane protein7e-23106
NC_008149:1842500:187584118758411876380540Yersinia pestis Nepal516, complete genomeattachment invasion locus protein precursor7e-23106
NC_009381:1064227:106911310691131069652540Yersinia pestis Pestoides F chromosome, complete genomeattachment invasion locus protein7e-23106
NC_009708:2245586:225114522511452251684540Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeAil/Lom family protein7e-23106
NC_014029:2138000:214574721457472146286540Yersinia pestis Z176003 chromosome, complete genomeattachment invasion locus protein7e-23106
NC_017160:2054289:207333920733392073878540Yersinia pestis D182038 chromosome, complete genomeattachment invasion locus protein7e-23106
NC_017168:3290380:329464432946443295183540Yersinia pestis A1122 chromosome, complete genomeattachment invasion locus protein7e-23106
NC_017265:1765399:178235417823541782893540Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,attachment invasion locus protein7e-23106
NC_011149:1870931:188065618806561881213558Salmonella enterica subsp. enterica serovar Agona str. SL483,virulence membrane protein PagC5e-2097.1
NC_011094:1282385:129890312989031299460558Salmonella enterica subsp. enterica serovar Schwarzengrund strouter membrane invasion protein5e-2097.1
NC_011274:376970:388376388376388900525Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-2096.3
NC_016831:2627515:263366326336632634187525Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative outer membrane protein8e-2096.3
NC_011083:403022:437515437515438039525Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,attachment invasion locus protein8e-2096.3
NC_003198:378844:390264390264390788525Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible outer membrane protein8e-2096.3
NC_004631:2584244:259032525903252590849525Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible outer membrane protein8e-2096.3
NC_016832:2581145:258722625872262587750525Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,outer membrane protein8e-2096.3
NC_013716:5201097:525252552525255253100576Citrobacter rodentium ICC168, complete genomeputative virulence-related outer membrane protein1e-1995.9
NC_010067:1655815:166550816655081666065558Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1995.9
NC_003198:1771432:178117717811771781734558Salmonella enterica subsp. enterica serovar Typhi str. CT18,outer membrane invasion protein2e-1995.5
NC_004631:1182883:119939811993981199955558Salmonella enterica subsp. enterica serovar Typhi Ty2, completeouter membrane invasion protein2e-1995.5
NC_016832:1182496:119837011983701198927558Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Virulence membrane protein pagC2e-1995.5
NC_006511:2467763:247384324738432474367525Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible outer membrane protein1e-1995.5
NC_010102:2721374:272752227275222728046525Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1995.5
NC_011080:383441:394848394848395372525Salmonella enterica subsp. enterica serovar Newport str. SL254,attachment invasion locus protein1e-1995.5
NC_011149:361765:373185373185373709525Salmonella enterica subsp. enterica serovar Agona str. SL483,attachment invasion locus protein1e-1995.5
NC_011147:2463299:246937924693792469903525Salmonella enterica subsp. enterica serovar Paratyphi A strouter membrane protein1e-1995.5
NC_015761:1181186:121060712106071211164558Salmonella bongori NCTC 12419, complete genomeouter membrane invasion protein1e-1995.5
NC_016857:1276340:128910412891041289661558Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74virulence membrane protein PagC2e-1995.1
NC_016856:1326503:134222613422261342783558Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Svirulence membrane protein PAGC precursor2e-1995.1
NC_012125:2531817:254152925415292542086558Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane invasion protein2e-1995.1
NC_011083:1323827:133729313372931337850558Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,virulence membrane protein PagC2e-1995.1
NC_006905:1342474:136388513638851364442558Salmonella enterica subsp. enterica serovar Choleraesuis strPhoP regulated: reduced macrophage survival2e-1995.1
NC_010102:1779707:178941817894181789975558Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1995.1
NC_003197:1320861:133225113322511332808558Salmonella typhimurium LT2, complete genomevirulence membrane protein PAGC precursor2e-1995.1
NC_016860:1317174:132993813299381330495558Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane invasion protein2e-1995.1
NC_016863:1277652:129041612904161290973558Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1virulence membrane protein PAGC precursor2e-1995.1
NC_017046:1277787:128917712891771289734558Salmonella enterica subsp. enterica serovar Typhimurium str. 798outer membrane invasion protein (PagC)2e-1995.1
NC_011147:1650142:165902616590261659583558Salmonella enterica subsp. enterica serovar Paratyphi A strouter membrane invasion protein2e-1995.1
NC_006511:1654959:166384316638431664400558Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCouter membrane invasion protein2e-1995.1
NC_016831:1083871:109527510952751095832558Salmonella enterica subsp. enterica serovar Gallinarum/pullorumouter membrane invasion protein (PagC)2e-1995.1
NC_011294:1896168:190587919058791906436558Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane invasion protein PagC2e-1995.1
NC_011274:1928939:193865019386501939207558Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91outer membrane invasion protein PagC2e-1995.1
NC_011205:2024458:203417020341702034727558Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853virulence membrane protein PagC2e-1995.1
NC_011080:1321268:133404213340421334599558Salmonella enterica subsp. enterica serovar Newport str. SL254,virulence membrane protein PagC2e-1995.1
NC_002655:3919545:392514139251413925674534Escherichia coli O157:H7 EDL933, complete genomeputative PagC-like membrane protein4e-1994.4
NC_011353:3956630:396222639622263962759534Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeouter membrane invasion protein4e-1994.4
NC_011601:3338888:334448433444843345032549Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomePagC-like membrane protein3e-1994.4
NC_013941:3676146:368174236817423682383642Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1994.4
NC_013008:3911356:391695239169523917500549Escherichia coli O157:H7 str. TW14359 chromosome, complete genomePagC-like membrane protein4e-1994
NC_002695:3852233:385782938578293858377549Escherichia coli O157:H7 str. Sakai, complete genomeputative virulence-related membrane protein4e-1994
NC_014228:3591758:359665935966593597237579Xenorhabdus nematophila ATCC 19061, complete genomeVirulence membrane protein pagC precursor4e-1994
NC_016810:1276340:128919112891911289661471Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane invasion protein (PagC)7e-1993.2
NC_006155:2084669:209089520908952091446552Yersinia pseudotuberculosis IP 32953, complete genomeattachment invasion locus protein3e-1891.3
NC_010465:2582080:259258225925822593133552Yersinia pseudotuberculosis YPIII, complete genomevirulence-related outer membrane protein3e-1890.9
NC_014618:4312295:433423443342344334782549Enterobacter cloacae SCF1 chromosome, complete genomevirulence-related outer membrane protein7e-1889.7
NC_017168:3535786:355119335511933551744552Yersinia pestis A1122 chromosome, complete genomeattachment invasion locus protein1e-1789
NC_005810:1663672:167948116794811680032552Yersinia pestis biovar Microtus str. 91001, complete genomeattachment invasion locus protein1e-1789
NC_010159:2128157:213631321363132136864552Yersinia pestis Angola, complete genomeAil/Lom family protein1e-1789
NC_003143:2101902:210926921092692109820552Yersinia pestis CO92, complete genomeattachment invasion locus protein1e-1789
NC_008150:1384102:139234813923481392899552Yersinia pestis Antiqua, complete genomeattachment invasion locus protein1e-1789
NC_004088:2691565:270700827070082707559552Yersinia pestis KIM, complete genomeouter membrane protein1e-1789
NC_009381:1414985:142636514263651426916552Yersinia pestis Pestoides F chromosome, complete genomeattachment invasion locus protein1e-1789
NC_014029:2388500:240024424002442400795552Yersinia pestis Z176003 chromosome, complete genomeattachment invasion locus protein1e-1789
NC_017154:2100587:210881121088112109362552Yersinia pestis D106004 chromosome, complete genomeattachment invasion locus protein1e-1789
NC_017160:2414000:242925024292502429801552Yersinia pestis D182038 chromosome, complete genomeattachment invasion locus protein1e-1789
NC_009648:293052:305359305359305979621Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative outer membrane protein8e-1786.3
NC_011601:1466496:147003714700371470636600Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeouter membrane precursor Lom2e-1581.6
NC_002655:919654:923849923849924448600Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane protein of prophage CP-933K4e-1580.5
NC_011742:585908:601253601253601852600Escherichia coli S88 chromosome, complete genomeLom-like outer membrane protein of prophage6e-1580.1
NC_004431:1352906:136824413682441368843600Escherichia coli CFT073, complete genomePutative Lom-like outer membrane protein of prophage6e-1580.1
NC_011750:919953:932398932398932997600Escherichia coli IAI39 chromosome, complete genomeputative Lom-like outer membrane protein of prophage6e-1580.1
NC_011751:1377457:139273713927371393336600Escherichia coli UMN026 chromosome, complete genomeputative Lom-like outer membrane protein of phage origin7e-1580.1
NC_002695:917509:922198922198922797600Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein precursor9e-1579.7
NC_011353:921500:925563925563926162600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein9e-1579.7
NC_013008:918215:927156927156927755600Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane protein of prophage CP-933K9e-1579.7
NC_013941:338121:342337342337342936600Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeenterobacterial Ail/Lom family protein9e-1579.7
NC_011750:1931384:193600819360081936607600Escherichia coli IAI39 chromosome, complete genomeputative Lom-like outer membrane protein of prophage1e-1479.3
AP010958:3627355:363308936330893633499411Escherichia coli O103:H2 str. 12009 DNA, complete genomePagC-like membrane protein1e-1479.3
AP010958:5090696:511354151135415113951411Escherichia coli O103:H2 str. 12009 DNA, complete genomePagC-like protein1e-1479.3
NC_013353:3627355:363308936330893633499411Escherichia coli O103:H2 str. 12009, complete genomePagC-like membrane protein1e-1479.3
NC_013353:5090696:511354151135415113951411Escherichia coli O103:H2 str. 12009, complete genomePagC-like protein1e-1479.3
NC_004431:3012668:302704330270433027642600Escherichia coli CFT073, complete genomePutative outer membrane protein of prophage1e-1479
NC_007613:1038000:104148810414881042087600Shigella boydii Sb227, complete genomeputative membrane protein precursor3e-1477.8
NC_011601:1077548:108204010820401082639600Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeouter membrane precursor Lom5e-1477
NC_011601:756885:765302765302765901600Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeouter membrane precursor Lom5e-1477
NC_008563:1505405:150887115088711509470600Escherichia coli APEC O1, complete genomeputative outer membrane protein of prophage6e-1476.6
NC_013361:3597812:361602636160263616664639Escherichia coli O26:H11 str. 11368 chromosome, complete genomeouter membrane precursor Lom1e-1375.9
NC_013353:604719:608184608184608783600Escherichia coli O103:H2 str. 12009, complete genomeouter membrane precursor Lom2e-1375.5
AP010958:604719:608184608184608783600Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane precursor Lom2e-1375.5
NC_009800:1657550:166139116613911661990600Escherichia coli HS, complete genomeenterobacterial Ail/Lom family protein4e-1374.3
NC_013008:2561586:257893025789302579529600Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeAil/Lom family protein4e-1374.3
NC_011353:2563056:257995025799502580549600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein4e-1374.3
NC_002695:2893951:289841628984162899015600Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein Lom precursor4e-1374.3
NC_013364:2522888:253916025391602539759600Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane Lom4e-1374.3
NC_012967:1593101:160594716059471606546600Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-1374.3
NC_002655:2730659:274769727476972748296600Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane protein of prophage CP-933U3e-1374.3
NC_002695:2158314:216238921623892162988600Escherichia coli O157:H7 str. Sakai, complete genomeputative outer host membrane protein precursor3e-1374.3
NC_002695:2655445:267233926723392672938600Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein precursor3e-1374.3
NC_013364:1997891:201367820136782014277600Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane Lom3e-1374.3
NC_011353:1195179:121177112117711212370600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein5e-1373.9
NC_011353:2892265:289391428939142894513600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein5e-1373.9
NC_013008:2889743:289420828942082894807600Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane protein Lom5e-1373.9
NC_002695:1794635:179817917981791798778600Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein precursor4e-1373.9
NC_011415:644811:648379648379648978600Escherichia coli SE11 chromosome, complete genomeputative phage outer membrane protein6e-1373.6
AP010958:1305712:131013313101331310771639Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane precursor Lom6e-1373.6
NC_013353:1305712:131013313101331310771639Escherichia coli O103:H2 str. 12009, complete genomeouter membrane precursor Lom6e-1373.6
NC_013361:649518:653695653695654294600Escherichia coli O26:H11 str. 11368 chromosome, complete genomeouter membrane precursor Lom6e-1373.6
NC_013941:1963523:196857919685791969178600Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeenterobacterial Ail/Lom family protein7e-1373.2
NC_013941:2425233:244198724419872442586600Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeenterobacterial Ail/Lom family protein7e-1373.2
NC_013941:1014386:101922710192271019826600Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeenterobacterial Ail/Lom family protein7e-1373.2
NC_013364:3312379:331907633190763319675600Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane Lom2e-1272
NC_013364:1477248:148171214817121482311600Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane Lom2e-1272
NC_011353:1716037:171977917197791720378600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein2e-1271.6
NC_013008:1715831:171875417187541719353600Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLom-like outer membrane protein of cryptic prophage CP-933P2e-1271.6
NC_002655:1909139:192539019253901925989600Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane protein Lom precursor of prophage CP-933O2e-1271.6
NC_013941:733286:736769736769737368600Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-1271.2
NC_013361:1896446:191290019129001913499600Escherichia coli O26:H11 str. 11368 chromosome, complete genomeouter membrane precursor Lom3e-1271.2
NC_013353:867869:872034872034872633600Escherichia coli O103:H2 str. 12009, complete genomeouter membrane precursor Lom4e-1270.9
AP010958:867869:872034872034872633600Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane precursor Lom4e-1270.9
NC_013353:2134556:214717221471722147771600Escherichia coli O103:H2 str. 12009, complete genomeouter membrane precursor Lom4e-1270.9
AP010958:2134556:214717221471722147771600Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane precursor Lom4e-1270.9
NC_013353:1472506:148661214866121487211600Escherichia coli O103:H2 str. 12009, complete genomeouter membrane precursor Lom4e-1270.9
AP010958:1472506:148661214866121487211600Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane precursor Lom4e-1270.9
NC_012779:3176820:321597332159733216620648Edwardsiella ictaluri 93-146, complete genomeresistance to complement killing5e-1270.5
NC_013008:1761165:177671917767191777318600Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane protein Lom2e-1168.2
NC_013364:863209:879795879795880394600Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane Lom2e-1168.2
NC_012779:2928000:293249129324912933036546Edwardsiella ictaluri 93-146, complete genomehypothetical protein8e-1166.6
NC_011353:1761977:177774317777431778342600Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeAil/Lom family protein9e-1166.2
NC_016832:3020000:302459230245923025128537Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Outer membrane protein (Associated with virulence)3e-0754.7
NC_011083:3171171:317575931757593176295537Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,outer membrane protein3e-0754.7
NC_003198:3042000:305004530500453050581537Salmonella enterica subsp. enterica serovar Typhi str. CT18,outer membrane protein (associated with virulence)3e-0754.7
NC_004631:3030580:303595230359523036488537Salmonella enterica subsp. enterica serovar Typhi Ty2, completeouter membrane protein3e-0754.7