Pre_GI: BLASTP Hits

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Query: NC_012917:1506083:1543050 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1543050, End: 1543607, Length: 558

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:3316877:332525333252533325795543Edwardsiella ictaluri 93-146, complete genomemonofunctional chorismate mutase (CM-F)7e-28123
NC_012912:4071859:410253041025304103060531Dickeya zeae Ech1591, complete genomechorismate mutase4e-26117
NC_013508:3188978:321294532129453213514570Edwardsiella tarda EIB202, complete genomechorismate mutase7e-26116
NC_009436:2056000:205721820572182057760543Enterobacter sp. 638, complete genomechorismate mutase1e-22106
NC_015761:1181186:122696912269691227514546Salmonella bongori NCTC 12419, complete genomechorismate mutase1e-1892.8
NC_016514:1183356:118741511874151187990576Enterobacter cloacae EcWSU1 chromosome, complete genomemonofunctional chorismate mutase4e-1787.8