Pre_GI: BLASTP Hits

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Query: NC_012914:5618000:5643875 Paenibacillus sp. JDR-2, complete genome

Start: 5643875, End: 5644627, Length: 753

Host Lineage: Paenibacillus; Paenibacillus; Paenibacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Isolation: Sweet gum stem wood buried in surface soil; Temp: Mesophile; Temp: 30 C; Habitat: Host, Wood. Paenibacillus sp. JDR-2 was isolated from sweet gum stem wood buried in surface soil. This organism is able to break down methylglucuronxylan in hemicellulose. Paenibacillus sp. JDR-2 may be useful in the production of alternative fuels from plant biomass.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009921:3666898:368591536859153686760846Frankia sp. EAN1pec, complete genomebinding-protein-dependent transport systems inner membrane component9e-42170
NC_002678:7004370:702902470290247029779756Mesorhizobium loti MAFF303099, complete genomeABC transporter, permease protein1e-41170
NC_011894:3029964:307557230755723076393822Methylobacterium nodulans ORS 2060, complete genomebinding-protein-dependent transport systems inner membrane component1e-36153
NC_010511:871905:879670879670880491822Methylobacterium sp. 4-46 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein2e-35149
NC_010572:1081236:110506311050631105926864Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ABC transporter permease protein2e-35149
NC_014171:723155:747020747020747772753Bacillus thuringiensis BMB171 chromosome, complete genomehydroxymethylpyrimidine transport system permease8e-35147
NC_005945:754517:753768753768754520753Bacillus anthracis str. Sterne, complete genomeABC transporter, permease protein, putative9e-34143
NC_010623:72500:912379123792070834Burkholderia phymatum STM815 chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component2e-33142
NC_003063:304962:330953330953331756804Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein6e-32137
NC_015276:1531159:153680015368001537759960Marinomonas mediterranea MMB-1 chromosome, complete genomeABC-type transporter, integral membrane subunit5e-31134
NC_015559:1478114:149525914952591496050792Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeABC transporter integral membrane protein3e-30132
NC_008148:3024867:304361230436123044412801Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component1e-29129
NC_020210:2133996:218123921812392182099861Geobacillus sp. GHH01, complete genomeputative aliphatic sulfonate ABC transporter permease1e-28126
NC_014829:1475000:147924214792421480129888Bacillus cellulosilyticus DSM 2522 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component6e-28124
NC_014623:7133149:714453371445337145288756Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeABC transporter permease1e-27123
NC_012108:481657:498861498861499610750Desulfobacterium autotrophicum HRM2, complete genomeABC-type transporter, permease protein1e-27123
NC_008148:3024867:304284130428413043611771Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component4e-26118
NC_014829:4565467:456622545662254566974750Bacillus cellulosilyticus DSM 2522 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-26118
NC_020211:3398281:342261534226153423382768Serratia marcescens WW4, complete genomeABC transporter7e-26117
NC_018644:137755:164269164269164931663Alpha proteobacterium HIMB59 chromosome, complete genomeBinding-protein-dependent transport system inner membrane component3e-25115
NC_013457:979102:996543996543997343801Vibrio sp. Ex25 chromosome 2, complete genomehydroxymethylpyrimidine ABC transporter transmembrane component2e-24112
NC_014376:3214222:322811232281123228909798Clostridium saccharolyticum WM1 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-24112
NC_020908:1920169:193948519394851940228744Octadecabacter arcticus 238, complete genomeABC transporter permease protein7e-24110
NC_003030:1510000:154295015429501543702753Clostridium acetobutylicum ATCC 824, complete genomeABC transporter, permease component8e-24110
NC_002696:2829002:285313728531372853895759Caulobacter crescentus CB15, complete genomeABC transporter, permease protein, putative1e-23110
NC_008278:132000:139478139478140227750Frankia alni ACN14a, complete genomehypothetical protein; putative membrane protein; putative permease of ABC transporter4e-23108
NC_012914:5372712:539255953925595393455897Paenibacillus sp. JDR-2, complete genomebinding-protein-dependent transport systems inner membrane component4e-23108
NC_019970:813917:831740831740832549810Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system, permease component4e-23108
NC_014829:1475000:147843514784351479241807Bacillus cellulosilyticus DSM 2522 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-22106
NC_014931:4985500:499939949993995000169771Variovorax paradoxus EPS chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-21102
NC_013515:550464:553101553101553850750Streptobacillus moniliformis DSM 12112, complete genomebinding-protein-dependent transport systems inner membrane component3e-21102
NC_016627:1807866:182665718266571827475819Clostridium clariflavum DSM 19732 chromosome, complete genomenitrate/sulfonate/bicarbonate ABC transporter permease4e-21102
NC_017075:4259460:427775342777534278523771Rubrivivax gelatinosus IL144, complete genomeABC transporter permease4e-21101
NC_016628:537137:569671569671570471801Vibrio furnissii NCTC 11218 chromosome 2, complete sequencenitrate/sulfonate/bicarbonate ABC transporter permease9e-21100
NC_004463:60225:821388213882956819Bradyrhizobium japonicum USDA 110, complete genomeABC transporter permease protein2e-1995.9
NC_015276:1531159:153589815358981536803906Marinomonas mediterranea MMB-1 chromosome, complete genomeABC-type transporter, integral membrane subunit1e-1894
NC_016584:1912000:191311419131141913905792Desulfosporosinus orientis DSM 765 chromosome, complete genomenitrate/sulfonate/bicarbonate ABC transporter permease3e-1892.4
NC_011837:1056888:105993710599371060764828Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-1892
NC_002179:904518:9092219092219109961776Chlamydophila pneumoniae AR39, complete genomeABC transporter, permease protein, putative4e-1891.7
NC_000922:1147855:1160418116041811621931776Chlamydophila pneumoniae CWL029, complete genomeABC transporter permease4e-1891.7
NC_002491:1147169:1156824115682411585991776Chlamydophila pneumoniae J138, complete genomeABC transporter permease4e-1891.7
NC_005043:1143557:1156121115612111578961776Chlamydophila pneumoniae TW-183, complete genomeABC transporter4e-1891.7
NC_014147:1200984:120661712066171207369753Moraxella catarrhalis RH4 chromosome, complete genomeABC transporter permease protein5e-1891.7
NC_017285:913000:9163859163859181601776Chlamydophila pneumoniae LPCoLN chromosome, complete genomeABC transporter permease7e-1890.9
NC_012914:5372712:539345253934525394267816Paenibacillus sp. JDR-2, complete genomebinding-protein-dependent transport systems inner membrane component1e-1790.1
NC_013510:517878:532671532671533492822Thermomonospora curvata DSM 43183, complete genomebinding-protein-dependent transport systems inner membrane component4e-1788.6
NC_018720:357716:380916380916381704789Bifidobacterium asteroides PRL2011 chromosome, complete genomeABC transporter, permease protein1e-1687
NC_016627:2637226:263930926393092640169861Clostridium clariflavum DSM 19732 chromosome, complete genomenitrate/sulfonate/bicarbonate ABC transporter permease1e-1686.7
NC_015259:1512563:152895715289571529790834Polymorphum gilvum SL003B-26A1 chromosome, complete genomeProbable aliphatic sulfonate ABC transporter, permease protein4e-1685.1
NC_015859:1898693:189869318986931899628936Corynebacterium variabile DSM 44702 chromosome, complete genomeABC transport system permease4e-1685.1
NC_013520:1936209:194300319430031943755753Veillonella parvula DSM 2008, complete genomebinding-protein-dependent transport systems inner membrane component5e-1684.7
NC_014839:12519:241362413624882747Pantoea sp. At-9b plasmid pPAT9B02, complete sequencebinding-protein-dependent transport systems inner membrane component1e-1584
NC_021066:2197490:219864621986462199437792Raoultella ornithinolytica B6, complete genomealkanesulfonate transporter permease subunit3e-1582.4
NC_015660:739040:738247738247739056810Geobacillus thermoglucosidasius C56-YS93 chromosome, completeABC transporter integral membrane protein1e-1480.5
NC_013316:2623199:264151726415172642260744Clostridium difficile R20291, complete genome3e-1479
NC_014614:86213:913679136792236870Clostridium sticklandii, complete genomeSsuC3e-1479
NC_021182:4186515:420359942035994204381783Clostridium pasteurianum BC1, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system, permease component5e-1478.2
NC_015957:7348269:736944073694407369970531Streptomyces violaceusniger Tu 4113 chromosome, complete genomeABC transporter integral membrane subunit7e-1477.8
NC_016048:522637:525277525277526092816Oscillibacter valericigenes Sjm18-20, complete genomeputative ABC transporter permease protein8e-1477.4
NC_016943:4194002:424408742440874245025939Blastococcus saxobsidens DD2, complete genomeputative Binding-protein-dependent transport systems inner membrane component9e-1373.9
NC_013406:1217385:126795212679521268731780Paenibacillus sp. Y412MC10 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-1273.6
NC_014915:2963500:300530530053053006114810Geobacillus sp. Y412MC52 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-1273.2
NC_013411:597235:597821597821598630810Geobacillus sp. Y412MC61, complete genomebinding-protein-dependent transport systems inner membrane component2e-1273.2
NC_007907:2830574:283883128388312839589759Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1272.4
NC_014121:2745097:274625227462522747043792Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completealkanesulfonate transporter permease subunit3e-1272.4
NC_007952:2812996:283372928337292834592864Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit3e-1272
NC_015275:521436:533624533624534400777Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, integral membrane subunit4e-1272
NC_014500:2934232:293423229342322935023792Dickeya dadantii 3937 chromosome, complete genomealkanesulfonates transport system permease5e-1271.6
NC_013421:4714478:4755899475589947575091611Pectobacterium wasabiae WPP163, complete genomebinding-protein-dependent transport systems inner membrane component4e-1271.6
NC_021182:4186515:419716441971644197994831Clostridium pasteurianum BC1, complete genomeABC-type nitrate/sulfonate/bicarbonate transport system, permease component6e-1271.2
NC_011832:1148859:117477911747791175618840Candidatus Methanosphaerula palustris E1-9c, complete genomebinding-protein-dependent transport systems inner membrane component2e-1169.7
NC_015565:1163148:116623311662331167036804Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeABC transporter integral membrane protein2e-1169.3
NC_016935:4813916:481600948160094816845837Paenibacillus mucilaginosus 3016 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein7e-1167.8
NC_016023:1839503:184165118416511842409759Bacillus coagulans 36D1 chromosome, complete genomeABC transporter integral membrane protein9e-1167.4
NC_012912:2998511:2998511299851130000971587Dickeya zeae Ech1591, complete genomebinding-protein-dependent transport systems inner membrane component1e-1066.6
NC_015172:1429266:1442371144237114433931023Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-1065.9
NC_010510:409469:424812424812425699888Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completebinding-protein-dependent transport systems inner membrane component3e-1065.9
NC_005085:2457295:247921124792112479978768Chromobacterium violaceum ATCC 12472, complete genomeprobable ABC transporter permease protein3e-1065.9
NC_016514:891772:933689933689934516828Enterobacter cloacae EcWSU1 chromosome, complete genomeTaurine transport system permease protein tauC5e-1065.1
NC_008595:2432184:245572724557272456554828Mycobacterium avium 104, complete genomeputative aliphatic sulfonates transport permease protein SsuC7e-1064.3
NC_011757:1246000:128154012815401282421882Methylobacterium chloromethanicum CM4, complete genomebinding-protein-dependent transport systems inner membrane component8e-1064.3
NC_009634:547995:564167564167564928762Methanococcus vannielii SB chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-0962.8
NC_014733:107394:134470134470135264795Methylovorus sp. MP688 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-0962.8
NC_009439:4734237:474580747458074746637831Pseudomonas mendocina ymp, complete genomebinding-protein-dependent transport systems inner membrane component2e-0962.4
NC_017168:3192817:319474831947483195569822Yersinia pestis A1122 chromosome, complete genomeputative transport system permease5e-0961.6
NC_014377:1298806:130218413021841302924741Thermosediminibacter oceani DSM 16646 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component5e-0961.6
NC_019673:9084045:910154591015459102369825Saccharothrix espanaensis DSM 44229 complete genomeABC-type aliphatic sulfonates transporter,permease subunit5e-0961.6
NC_015847:1261276:127124712712471272008762Methanococcus maripaludis XI chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-0961.6
NC_005791:1173000:118387311838731184634762Methanococcus maripaludis S2, complete genometransport permease protein4e-0961.6
NC_011837:1056888:1062828106282810638981071Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-0961.2
NC_008542:1727000:172823717282371729049813Burkholderia cenocepacia HI2424 chromosome 1, complete sequencebinding-protein-dependent transport systems inner membrane component6e-0961.2
NC_008060:1182378:118355211835521184364813Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencebinding-protein-dependent transport systems inner membrane component6e-0961.2
NC_010508:1705500:170675717067571707569813Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencebinding-protein-dependent transport systems inner membrane component6e-0961.2
NC_011837:1056888:106393210639321064723792Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-0961.2
NC_009637:438037:453317453317454078762Methanococcus maripaludis C7 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component8e-0960.8
NC_009135:330628:354277354277355038762Methanococcus maripaludis C5, complete genomebinding-protein-dependent transport systems inner membrane component1e-0860.1
NC_013716:1298932:1298932129893213005001569Citrobacter rodentium ICC168, complete genomeABC transporter, permease component2e-0859.7
NC_014221:687537:689918689918690670753Truepera radiovictrix DSM 17093 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-0859.7
NC_009975:1374500:137795713779571378718762Methanococcus maripaludis C6, complete genomebinding-protein-dependent transport systems inner membrane component2e-0859.7
NC_015172:951550:955589955589956377789Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-0859.3
NC_009439:4734237:473533947353394736133795Pseudomonas mendocina ymp, complete genomebinding-protein-dependent transport systems inner membrane component2e-0859.3
NC_013421:1954915:195491519549151955688774Pectobacterium wasabiae WPP163, complete genomebinding-protein-dependent transport systems inner membrane component4e-0858.5
NC_012925:191501:205330205330206094765Streptococcus suis P1/7, complete genomebinding-protein-dependent transport system protein4e-0858.5
NC_016830:6499234:649923464992346500016783Pseudomonas fluorescens F113 chromosome, complete genomeprotein SsuC5e-0858.2
NC_019745:3778017:379342137934213794260840Gloeocapsa sp. PCC 7428, complete genomenitrate ABC transporter, inner membrane subunit7e-0857.8
NC_012225:345704:354194354194354964771Brachyspira hyodysenteriae WA1, complete genometaurine ABC transporter, permease protein1e-0757.4
NC_018607:290500:310784310784311554771Brachyspira pilosicoli B2904 chromosome, complete genometaurine ABC transporter permease2e-0756.2
NC_006138:656000:660924660924661679756Desulfotalea psychrophila LSv54, complete genomesimilar to ABC transporter, permease protein3e-0755.8
NC_014654:895298:899199899199899951753Halanaerobium sp. 'sapolanicus' chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-0755.8
NC_011961:304158:320064320064320873810Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit4e-0755.5
NC_014394:808734:823666823666824496831Gallionella capsiferriformans ES-2 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-0755.5
NC_017179:2539031:256915025691502569779630Clostridium difficile BI1, complete genomeABC transporter permease3e-0755.5
NC_015589:3241364:324228832422883242905618Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-0755.1
NC_013411:1168049:118585111858511186480630Geobacillus sp. Y412MC61, complete genomebinding-protein-dependent transport systems inner membrane component1e-0653.9
NC_014915:308056:325858325858326487630Geobacillus sp. Y412MC52 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-0653.9
NC_007644:469181:470251470251471039789Moorella thermoacetica ATCC 39073, complete genomeBinding-protein-dependent transport systems inner membrane component1e-0653.5
NC_018664:2638102:264387826438782644672795Clostridium acidurici 9a chromosome, complete genomealiphatic sulfonates ABC transporter permease protein SsuC1e-0653.5
NC_009328:293000:312108312108312737630Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeglycine betaine/L-proline ABC transporter permease2e-0653.1
NC_016002:2591189:260637826063782607247870Pseudogulbenkiania sp. NH8B, complete genomeABC transporter permease2e-0652.8
NC_006510:310212:341910341910342539630Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-0652.8
NC_016593:353505:379641379641380270630Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completebinding-protein-dependent transport system inner membrane component2e-0652.8
NC_015589:870804:882372882372883175804Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-0652.8
NC_016047:3406488:342124934212493421920672Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecholine transport system permease opuBD2e-0652.8
NC_015136:1301576:132629113262911327148858Burkholderia sp. CCGE1001 chromosome 1, complete sequencenitrate/sulfonate/bicarbonate ABC transporter permease3e-0652.4
NC_009712:669647:701400701400702161762Candidatus Methanoregula boonei 6A8, complete genomebinding-protein-dependent transport systems inner membrane component4e-0652
NC_016627:2637226:264015326401532640938786Clostridium clariflavum DSM 19732 chromosome, complete genomenitrate/sulfonate/bicarbonate ABC transporter permease4e-0652
NC_014034:1507047:151154715115471512371825Rhodobacter capsulatus SB1003 chromosome, complete genomeABC transporter permease4e-0652
NC_004461:205068:213697213697214332636Staphylococcus epidermidis ATCC 12228, complete genomeopuCB protein6e-0651.6
NC_018750:7653000:767445576744557675315861Streptomyces venezuelae ATCC 10712, complete genomeABC transporter permease7e-0651.2
NC_015727:1294532:131091413109141311735822Cupriavidus necator N-1 plasmid BB1p, complete sequencebinding-protein-dependent transport system inner membrane protein7e-0651.2
NC_020291:1535402:155407415540741554853780Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative aliphatic sulfonates transport permease protein SsuC7e-0651.2
NC_009717:271385:284242284242285015774Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencebinding-protein-dependent transport systems inner membrane component8e-0650.8
NC_014640:4193193:421082542108254211676852Achromobacter xylosoxidans A8 chromosome, complete genomebinding-protein-dependent transporter inner membrane component family protein 478e-0650.8
NC_015437:1038476:105861610586161059353738Selenomonas sputigena ATCC 35185 chromosome, complete genomeABC-type transporter, integral membrane subunit9e-0650.8