Pre_GI: BLASTP Hits

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Query: NC_012850:459315:466227 Rhizobium leguminosarum bv. trifolii WSM1325, complete genome

Start: 466227, End: 467411, Length: 1185

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007761:781210:7940907940907952591170Rhizobium etli CFN 42, complete genomeprobable alpha-glycosyltransferase protein4e-61235
NC_020453:936396:9524389524389536821245Agromonas oligotrophica S58 DNA, complete genomealpha-glycosyltransferase1e-58227
NC_007761:781210:7952407952407964241185Rhizobium etli CFN 42, complete genomeprobable glycosyltransferase protein3e-53209
NC_011769:2248902:2267161226716122683181158Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeglycosyl transferase group 15e-52205
NC_013173:3679326:3722584372258437237651182Desulfomicrobium baculatum DSM 4028, complete genomeglycosyl transferase group 13e-40166
NC_008380:855246:8829168829168840881173Rhizobium leguminosarum bv. viciae 3841, complete genomeputative glycosyltransferase5e-34145
NC_005027:1304887:1305785130578513069631179Rhodopirellula baltica SH 1, complete genomeglycosyl transferase8e-34144
NC_016112:806256:8197158197158208661152Methylomicrobium alcaliphilum chromosome, complete genomeglycosyltransferase2e-33143
NC_007512:2024880:2057628205762820588031176Pelodictyon luteolum DSM 273, complete genomeprobable glycosyl transferase5e-32139
NC_012918:3009211:3029866302986630311221257Geobacter sp. M21 chromosome, complete genomegroup 1 glycosyl transferase1e-28127
NC_013008:2733203:2744698274469827459121215Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeglycosyl transferase2e-27123
NC_011353:2734222:2745717274571727469311215Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeWbdP2e-27123
NC_002695:2769387:2780882278088227820961215Escherichia coli O157:H7 str. Sakai, complete genomeputative glycosyl transferase2e-27123
NC_002655:2839600:2851096285109628523101215Escherichia coli O157:H7 EDL933, complete genomeglycosyl transferase2e-27123
NC_017075:4421486:4438501443850144397151215Rubrivivax gelatinosus IL144, complete genomegroup 1 glycosyl transferase1e-26120
NC_009379:304222:3042223042223054541233Polynucleobacter sp. QLW-P1DMWA-1, complete genomeglycosyl transferase, group 19e-26118
NC_007759:2315490:2324970232497023261631194Syntrophus aciditrophicus SB, complete genomemannosyltransferase5e-1272.4
NC_014836:2723060:2735207273520727363941188Desulfurispirillum indicum S5 chromosome, complete genomegroup 1 glycosyl transferase2e-1067
NC_009454:358044:3746343746343757971164Pelotomaculum thermopropionicum SI, complete genomeglycosyltransferase2e-0963.9
NC_009483:4434375:4438486443848644396461161Geobacter uraniireducens Rf4 chromosome, complete genomegroup 1 glycosyl transferase7e-0962
NC_010814:2074266:2079111207911120802591149Geobacter lovleyi SZ, complete genomeglycosyl transferase group 11e-0861.2
NC_017080:2995001:3008174300817430092441071Phycisphaera mikurensis NBRC 102666, complete genomeputative glycosyltransferase2e-0860.8
NC_012918:3009211:3025007302500730260711065Geobacter sp. M21 chromosome, complete genomegroup 1 glycosyl transferase4e-0859.7
NC_015578:1807428:182182518218251822793969Treponema primitia ZAS-2 chromosome, complete genomeglycosyltransferase, family 12e-0757
NC_014758:1207894:1233131123313112342191089Calditerrivibrio nitroreducens DSM 19672 chromosome, completeglycosyl transferase group 13e-0756.6
NC_016935:976059:9937119937119948591149Paenibacillus mucilaginosus 3016 chromosome, complete genomeglycosyltransferase family 4 protein7e-0755.5
NC_013592:577831:5847845847845858871104Dickeya dadantii Ech586, complete genomeglycosyl transferase group 19e-0755.1
NC_015690:977131:9899009899009910481149Paenibacillus mucilaginosus KNP414 chromosome, complete genomeglycosyltransferase family 4 protein9e-0755.1
NC_011369:4395773:4398283439828343995061224Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completegroup 1 glycosyl transferase8e-0755.1
NC_015554:2355379:2355379235537923564911113Alteromonas sp. SN2 chromosome, complete genomeglycosyltransferase2e-0653.9
NC_010571:5127812:5127812512781251290381227Opitutus terrae PB90-1, complete genomeglycosyl transferase group 12e-0653.5
NC_014500:564864:5779525779525790671116Dickeya dadantii 3937 chromosome, complete genomealpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase6e-0652.4
NC_007955:742834:7522887522887534091122Methanococcoides burtonii DSM 6242, complete genomeglycosyl transferase, group 17e-0652
NC_012912:4012112:4027791402779140289031113Dickeya zeae Ech1591, complete genomeglycosyl transferase group 11e-0551.6