Pre_GI: BLASTP Hits

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Query: NC_012848:320883:329311 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,

Start: 329311, End: 329982, Length: 672

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014623:464324:476316476316476870555Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephosphoglycolate phosphatase7e-29127
NC_014532:1713987:173241517324151733092678Halomonas elongata DSM 2581, complete genomeHAD-superfamily hydrolase4e-28124
NC_018750:3481476:349012534901253490778654Streptomyces venezuelae ATCC 10712, complete genomeputative phosphatase YieH4e-27121
NC_009952:526456:532144532144532884741Dinoroseobacter shibae DFL 12, complete genomeHAD-superfamily hydrolase7e-27120
NC_009648:4497749:451856145185614519226666Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome6-phosphogluconate phosphatase8e-26117
NC_008781:2883968:288727028872702887953684Polaromonas naphthalenivorans CJ2, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 38e-25114
NC_011751:4373961:438050243805024381167666Escherichia coli UMN026 chromosome, complete genome6-phosphogluconate phosphatase1e-23110
NC_010498:4166903:417344441734444174109666Escherichia coli SMS-3-5, complete genomeHAD family hydrolase3e-23108
NC_011750:4490573:449711444971144497779666Escherichia coli IAI39 chromosome, complete genome6-phosphogluconate phosphatase3e-23108
NC_002695:4678945:468548446854844686149666Escherichia coli O157:H7 str. Sakai, complete genomeputative phosphatase7e-23107
NC_002655:4747926:475446547544654755130666Escherichia coli O157:H7 EDL933, complete genomeputative phosphatase7e-23107
NC_011353:4782040:478857947885794789244666Escherichia coli O157:H7 str. EC4115 chromosome, complete genome6-phosphogluconate phosphatase7e-23107
NC_013008:4738083:474462247446224745287666Escherichia coli O157:H7 str. TW14359 chromosome, complete genome6-phosphogluconate phosphatase7e-23107
NC_013941:4567820:457298045729804573645666Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHAD hydrolase, IA family7e-23107
NC_010170:1661915:168144416814441682124681Bordetella petrii, complete genomehypothetical protein1e-21102
NC_020260:3931567:395450139545013955166666Cronobacter sakazakii Sp291, complete genome6-phosphogluconate phosphatase2e-21102
NC_015856:1271295:128695112869511287652702Collimonas fungivorans Ter331 chromosome, complete genomephosphoglycolate phosphatase3e-21102
NC_004337:3590323:385328638532863853942657Shigella flexneri 2a str. 301, complete genomeputative phosphatase4e-21101
NC_008209:695269:700100700100700744645Roseobacter denitrificans OCh 114, complete genomehydrolase, putative5e-1994.7
NC_015730:3853065:387002938700293870679651Roseobacter litoralis Och 149 chromosome, complete genomeputative haloacid dehalogenase-like hydrolase2e-1892.4
NC_014960:1950648:195623019562301956889660Anaerolinea thermophila UNI-1, complete genomeputative hydrolase2e-1686.3
NC_015555:114977:132905132905133561657Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeHAD-superfamily hydrolase, subfamily IA, variant 37e-1580.9
NC_020209:2119845:214067221406722141346675Pseudomonas poae RE*1-1-14, complete genomeHAD family hydrolase8e-1580.5
NC_017095:1627686:165166416516641652311648Fervidobacterium pennivorans DSM 9078 chromosome, complete genomebeta-phosphoglucomutase3e-1478.6
NC_014654:2277461:229450522945052295170666Halanaerobium sp. 'sapolanicus' chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 33e-1375.5
NC_016024:1974715:198201119820111982670660Candidatus Chloracidobacterium thermophilum B chromosome chromosomehaloacid dehalogenase superfamily protein4e-1374.7
NC_009437:475817:491601491601492272672Caldicellulosiruptor saccharolyticus DSM 8903, complete genomebeta-phosphoglucomutase family hydrolase8e-1373.9
NC_014387:177308:182723182723183355633Butyrivibrio proteoclasticus B316 chromosome 1, complete genomebeta-phosphoglucomutase family hydrolase1e-1273.2
NC_013171:1677543:168142716814271682068642Anaerococcus prevotii DSM 20548, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 31e-1273.2
NC_014655:614874:631843631843632481639Leadbetterella byssophila DSM 17132 chromosome, complete genomebeta-phosphoglucomutase2e-1272.8
NC_006576:217697:237614237614238414801Synechococcus elongatus PCC 6301, complete genomehypothetical protein3e-1272
NC_008702:2892605:291505129150512915770720Azoarcus sp. BH72, complete genomeputative CbbY family protein4e-1271.6
NC_015949:2101302:211043421104342111105672Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomebeta-phosphoglucomutase family hydrolase1e-1170.1
NC_014720:2420455:244171424417142442478765Caldicellulosiruptor kronotskyensis 2002 chromosome, completebeta-phosphoglucomutase family hydrolase2e-1169.7
NC_014624:2549219:255610625561062556762657Eubacterium limosum KIST612 chromosome, complete genomephosphatase/phosphohexomutase1e-1169.7
NC_014392:412916:430751430751431422672Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomebeta-phosphoglucomutase family hydrolase1e-1169.7
NC_014721:373607:388190388190388861672Caldicellulosiruptor kristjanssonii 177R1B chromosome, completebeta-phosphoglucomutase family hydrolase1e-1169.7
NC_010175:2925084:293005229300522930735684Chloroflexus aurantiacus J-10-fl, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 32e-1169.3
NC_012032:2925000:292539829253982926081684Chloroflexus sp. Y-400-fl, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 32e-1169.3
NC_015514:3307199:332807033280703328714645Cellulomonas fimi ATCC 484 chromosome, complete genomebeta-phosphoglucomutase8e-1167.4
NC_014652:2323598:233404523340452334761717Caldicellulosiruptor hydrothermalis 108 chromosome, completebeta-phosphoglucomutase family hydrolase7e-1167.4
NC_014219:2284000:229245822924582293108651Bacillus selenitireducens MLS10 chromosome, complete genomebeta-phosphoglucomutase7e-1167.4
NC_012034:438000:455572455572456243672Anaerocellum thermophilum DSM 6725, complete genomebeta-phosphoglucomutase family hydrolase6e-1167.4
NC_015873:1119500:113514911351491135826678Megasphaera elsdenii DSM 20460, complete genomeHAD-superfamily hydrolase1e-1066.2
NC_005773:4282840:430954743095474310134588Pseudomonas syringae pv. phaseolicola 1448A, complete genomehydrolase, haloacid dehalogenase-like family protein1e-1066.2
NC_004578:895019:907344907344907931588Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-1066.2
NC_008347:2677000:267771026777102678339630Maricaulis maris MCS10, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 32e-1065.9
NC_014221:1167261:117998811799881180650663Truepera radiovictrix DSM 17093 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 34e-1065.1
NC_015160:1734454:173706217370621737697636Odoribacter splanchnicus DSM 20712 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 33e-1065.1
NC_015500:78223:839608396084622663Treponema brennaborense DSM 12168 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 31e-0963.2
NC_017279:1355441:136914513691451369783639Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeHAD superfamily hydrolase3e-0962
NC_007958:4371125:437223543722354373050816Rhodopseudomonas palustris BisB5, complete genomeHAD-superfamily hydrolase subfamily IA, variant 33e-0962
NC_013162:811763:825589825589826212624Capnocytophaga ochracea DSM 7271, complete genomebeta-phosphoglucomutase6e-0961.2
NC_011898:3772899:378689237868923787551660Clostridium cellulolyticum H10, complete genomebeta-phosphoglucomutase5e-0961.2
NC_016782:1227246:123651012365101237205696Corynebacterium diphtheriae 241 chromosome, complete genomeputative hydrolase7e-0960.8
NC_016786:1218032:123647912364791237174696Corynebacterium diphtheriae HC01 chromosome, complete genomeputative hydrolase7e-0960.8
NC_016787:1207488:122593512259351226630696Corynebacterium diphtheriae HC03 chromosome, complete genomeputative hydrolase7e-0960.8
NC_016788:1214026:123592212359221236617696Corynebacterium diphtheriae HC04 chromosome, complete genomeputative hydrolase7e-0960.8
NC_016790:1177349:120331212033121204007696Corynebacterium diphtheriae VA01 chromosome, complete genomeputative hydrolase7e-0960.8
NC_016802:1212726:123581212358121236507696Corynebacterium diphtheriae HC02 chromosome, complete genomeputative hydrolase7e-0960.8
NC_003901:815389:835154835154835834681Methanosarcina mazei Go1, complete genomeBeta-phosphoglucomutase7e-0960.8
NC_002935:1237585:126274612627461263441696Corynebacterium diphtheriae NCTC 13129, complete genomePutative hydrolase6e-0960.8
NC_016783:1239293:126237912623791263074696Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative hydrolase6e-0960.8
NC_016789:1257392:128047712804771281172696Corynebacterium diphtheriae PW8 chromosome, complete genomeputative hydrolase6e-0960.8
NC_016799:1268706:129179212917921292487696Corynebacterium diphtheriae 31A chromosome, complete genomeputative hydrolase6e-0960.8
NC_016800:1243000:126490812649081265603696Corynebacterium diphtheriae BH8 chromosome, complete genomeputative hydrolase6e-0960.8
NC_016801:1255611:128157012815701282265696Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative hydrolase6e-0960.8
NC_016791:1266404:127043312704331271113681Clostridium sp. BNL1100 chromosome, complete genomebeta-phosphoglucomutase8e-0960.5
NC_014751:258037:258037258037258666630Mycoplasma leachii PG50 chromosome, complete genomebeta-phosphoglucomutase8e-0960.5
NC_015275:443213:447207447207447866660Clostridium lentocellum DSM 5427 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 31e-0860.5
NC_014644:1532500:154874615487461549393648Gardnerella vaginalis ATCC 14019 chromosome, complete genomebeta-phosphoglucomutase1e-0859.7
NC_014206:2516000:253891725389172539609693Geobacillus sp. C56-T3 chromosome, complete genomebeta-phosphoglucomutase2e-0859.3
NC_013411:1941762:195281619528161953508693Geobacillus sp. Y412MC61, complete genomebeta-phosphoglucomutase2e-0859.3
NC_014915:1080793:109276010927601093452693Geobacillus sp. Y412MC52 chromosome, complete genomebeta-phosphoglucomutase2e-0859.3
NC_017068:2786391:278639127863912787032642Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative hydrolase2e-0859.3
NC_014376:4369666:437470443747044375351648Clostridium saccharolyticum WM1 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 32e-0859.3
NC_020995:2636519:264327626432762643953678Enterococcus casseliflavus EC20, complete genomeHAD hydrolase, family IA3e-0858.5
NC_020389:1683120:168631116863111686967657Methanosarcina mazei Tuc01, complete genomeBeta-phosphoglucomutase4e-0858.5
NC_003901:1947491:194966119496611950317657Methanosarcina mazei Go1, complete genomeBeta-phosphoglucomutase4e-0858.5
NC_016785:1193471:121655812165581217253696Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative hydrolase4e-0858.5
NC_014118:1331164:135230013523001352974675Burkholderia sp. CCGE1002 chromosome chromosome 2, completeHAD-superfamily hydrolase, subfamily IA, variant 35e-0858.2
NC_005773:5310339:531626653162665316904639Pseudomonas syringae pv. phaseolicola 1448A, complete genomehydrolase, HAD-superfamily, subfamily IA, variant 36e-0857.8
NC_012039:257962:276720276720277355636Campylobacter lari RM2100, complete genomeHAD-superfamily hydrolase8e-0857.4
NC_008261:304000:325782325782326435654Clostridium perfringens ATCC 13124, complete genomehaloacid dehalogenase, IA family protein1e-0756.6
NC_003366:332500:354420354420355073654Clostridium perfringens str. 13, complete genomehypothetical protein1e-0756.6
NC_008312:3793760:379376037937603794422663Trichodesmium erythraeum IMS101, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 31e-0756.6
NC_015760:343874:363219363219363857639Streptococcus salivarius CCHSS3, complete genomeputative sugar phosphatase of HAD family1e-0756.6
NC_017986:5605197:563649556364955637178684Pseudomonas putida ND6 chromosome, complete genomeHAD family hydrolase2e-0756.2
NC_003210:2879906:288342228834222884078657Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-0755.8
NC_014387:1106901:111918111191811119822642Butyrivibrio proteoclasticus B316 chromosome 1, complete genomebeta-phosphoglucomutase PgmB2e-0755.8
NC_013174:1254874:127512712751271275804678Jonesia denitrificans DSM 20603, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 34e-0755.1
NC_016610:1574699:157700315770031577653651Tannerella forsythia ATCC 43037 chromosome, complete genomeHAD hydrolase4e-0755.1
NC_008262:297960:320522320522321175654Clostridium perfringens SM101, complete genomehaloacid dehalogenase, IA family protein4e-0755.1
NC_014215:1243125:126791712679171268642726Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,HAD-superfamily hydrolase4e-0755.1
NC_013202:606204:630888630888631532645Halomicrobium mukohataei DSM 12286, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 34e-0754.7
NC_015144:1453500:146859614685961469231636Weeksella virosa DSM 16922 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 36e-0754.3
NC_008639:2968000:296802529680252968687663Chlorobium phaeobacteroides DSM 266, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 38e-0753.9
NC_015859:1631573:163896816389681639669702Corynebacterium variabile DSM 44702 chromosome, complete genomephosphoribosyl-ATP pyrophosphatase9e-0753.9
NC_015389:809474:829742829742830416675Coriobacterium glomerans PW2 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 31e-0653.5
NC_014448:225414:245172245172245840669Mycoplasma hyorhinis HUB-1 chromosome, complete genomeputative beta-phosphoglucomutase2e-0653.1
NC_012779:2586175:258617525861752586825651Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-0653.1
NC_007952:1416000:142430514243051424997693Burkholderia xenovorans LB400 chromosome 2, complete sequenceHAD-superfamily hydrolase, subfamily IA, variant33e-0652
NC_020063:2565605:259700825970082597676669Enterobacteriaceae bacterium strain FGI 57, complete genomehaloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED4e-0651.6
NC_013510:5394432:543449954344995435305807Thermomonospora curvata DSM 43183, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 35e-0651.2
NC_017347:2437902:243838524383852439020636Staphylococcus aureus subsp. aureus T0131 chromosome, completeHAD-superfamily hydrolase6e-0651.2
NC_014844:2721746:274650827465082747281774Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeHAD-superfamily hydrolase8e-0650.4
NC_004463:8401060:840106084010608401746687Bradyrhizobium japonicum USDA 110, complete genomeputative phosphoglycolate phosphatase9e-0650.4