Pre_GI: BLASTN Hits

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Query: NC_012811:227541 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 227541, End: 271116, Length: 43576

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015186:1126830*1126830116450437675Acidiphilium multivorum AIU301, complete genome2e-48202BLASTN svgBLASTP svg
NC_015186:347346*34734637448527140Acidiphilium multivorum AIU301, complete genome9e-48200BLASTN svgBLASTP svg
NC_015138:4205986*4205986423312827143Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete5e-0661.9BLASTN svgBLASTP svg
NC_011991:65368653689197126604Agrobacterium vitis S4 plasmid pAtS4b, complete sequence2e-20109BLASTN svgBLASTP svg
NC_020453:68215006821500685438832889Agromonas oligotrophica S58 DNA, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence7e-33151BLASTN svgBLASTP svg
NC_013856:18976818976820782418057Azospirillum sp. B510 plasmid pAB510b, complete sequence1e-37167BLASTN svgBLASTP svg
NC_013854:21482152148215217320524991Azospirillum sp. B510, complete genome3e-23119BLASTN svgBLASTP svg
NC_013854:513196*51319653916325968Azospirillum sp. B510, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_004463:18986481898648196425565608Bradyrhizobium japonicum USDA 110, complete genome1e-43186BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome1e-43186BLASTN svgBLASTP svg
NC_012724:20685882068588209611727530Burkholderia glumae BGR1 chromosome 1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete9e-1487.7BLASTN svgBLASTP svg
NC_010801:48160148160150140619806Burkholderia multivorans ATCC 17616 chromosome 3, complete9e-1487.7BLASTN svgBLASTP svg
NC_009076:75535*7553510652630992Burkholderia pseudomallei 1106a chromosome I, complete sequence8e-0867.9BLASTN svgBLASTP svg
NC_009078:510525*51052554399133467Burkholderia pseudomallei 1106a chromosome II, complete sequence8e-0867.9BLASTN svgBLASTP svg
NC_007435:2352954*2352954238639233439Burkholderia pseudomallei 1710b chromosome II, complete sequence8e-0867.9BLASTN svgBLASTP svg
NC_006351:52050052050056649745998Burkholderia pseudomallei K96243 chromosome 2, complete sequence8e-0867.9BLASTN svgBLASTP svg
NC_010125:15383351538335158603047696Gluconacetobacter diazotrophicus PAl 5, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008789:47250047250049019017691Halorhodospira halophila SL1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_013169:612456*61245664773335278Kytococcus sedentarius DSM 20547, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_002678:50606705060670511283352164Mesorhizobium loti MAFF303099, complete genome2e-70276BLASTN svgBLASTP svg
NC_011757:44453434445343447709931757Methylobacterium chloromethanicum CM4, complete genome3e-35159BLASTN svgBLASTP svg
NC_011757:35409923540992357834237351Methylobacterium chloromethanicum CM4, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_011757:10914861091486111319221707Methylobacterium chloromethanicum CM4, complete genome3e-23119BLASTN svgBLASTP svg
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome02773BLASTN svgBLASTP svg
NC_011757:11212621121262114088219621Methylobacterium chloromethanicum CM4, complete genome02773BLASTN svgBLASTP svg
NC_011757:1532047*1532047155075218706Methylobacterium chloromethanicum CM4, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011757:42057944205794422846522672Methylobacterium chloromethanicum CM4, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011757:51700051700055359936600Methylobacterium chloromethanicum CM4, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_011757:51027325102732513806935338Methylobacterium chloromethanicum CM4, complete genome8e-150539BLASTN svgBLASTP svg
NC_012811:11053951105395112959924205Methylobacterium extorquens AM1 megaplasmid, complete sequence02773BLASTN svgBLASTP svg
NC_012811:31730831730834221324906Methylobacterium extorquens AM1 megaplasmid, complete sequence03158BLASTN svgBLASTP svg
NC_012808:4235567*4235567425812622560Methylobacterium extorquens AM1, complete genome02779BLASTN svgBLASTP svg
NC_012808:37118063711806373409922294Methylobacterium extorquens AM1, complete genome02775BLASTN svgBLASTP svg
NC_012808:19790001979000199740518406Methylobacterium extorquens AM1, complete genome6e-92347BLASTN svgBLASTP svg
NC_012808:40984654098465412359925135Methylobacterium extorquens AM1, complete genome4e-28135BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome02773BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome02773BLASTN svgBLASTP svg
NC_012808:38977513897751392263924889Methylobacterium extorquens AM1, complete genome04676BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome02781BLASTN svgBLASTP svg
NC_010172:57304657304660029627251Methylobacterium extorquens PA1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010172:4064087*4064087410309939013Methylobacterium extorquens PA1, complete genome3e-38168BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011894:90163090163092409922470Methylobacterium nodulans ORS 2060, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011894:43605774360577439709936523Methylobacterium nodulans ORS 2060, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011894:31612893161289320428142993Methylobacterium nodulans ORS 2060, complete genome0646BLASTN svgBLASTP svg
NC_010725:39929483992948402434231395Methylobacterium populi BJ001, complete genome5e-148533BLASTN svgBLASTP svg
NC_010725:4219500*4219500425012730628Methylobacterium populi BJ001, complete genome1e-34157BLASTN svgBLASTP svg
NC_010725:45119394511939454748235544Methylobacterium populi BJ001, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_010725:39619813961981398401922039Methylobacterium populi BJ001, complete genome0973BLASTN svgBLASTP svg
NC_010505:5496170*5496170552318327014Methylobacterium radiotolerans JCM 2831, complete genome3e-171611BLASTN svgBLASTP svg
NC_020126:85129088512908853149318586Myxococcus stipitatus DSM 14675, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_020911:30469163046916306823221317Octadecabacter antarcticus 307, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_011144:26742422674242270317628935Phenylobacterium zucineum HLK1, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete1e-0663.9BLASTN svgBLASTP svg
NC_009049:1934398*1934398196979735400Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence4e-19105BLASTN svgBLASTP svg
NC_007958:4371125*4371125441443443310Rhodopseudomonas palustris BisB5, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014006:2999500*2999500304199842499Sphingobium japonicum UT26S chromosome 1, complete genome2e-45192BLASTN svgBLASTP svg
NC_015957:72498737249873727238122509Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015957:3067919*3067919309418126263Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_014159:37920379205903321114Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete8e-0867.9BLASTN svgBLASTP svg