Pre_GI: BLASTP Hits

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Query: NC_012811:410776:418321 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 418321, End: 419820, Length: 1500

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013209:2414500:2429402242940224309941593Acetobacter pasteurianus IFO 3283-01, complete genomeporin B carbohydrate-selective OprB3e-1377
NC_017100:2414075:2430609243060924322011593Acetobacter pasteurianus IFO 3283-03, complete genomeporin B carbohydrate-selective OprB3e-1377
NC_017121:2413000:2427951242795124295431593Acetobacter pasteurianus IFO 3283-07, complete genomeporin B carbohydrate-selective OprB3e-1377
NC_017108:2413000:2427946242794624295381593Acetobacter pasteurianus IFO 3283-12, complete genomeporin B carbohydrate-selective OprB3e-1377
NC_017125:2415500:2430589243058924321811593Acetobacter pasteurianus IFO 3283-22, complete genomeporin B carbohydrate-selective OprB3e-1377
NC_017146:2416000:2430631243063124322231593Acetobacter pasteurianus IFO 3283-26, complete genomeporin B carbohydrate-selective OprB3e-1377
NC_017111:2413000:2427964242796424295561593Acetobacter pasteurianus IFO 3283-32, complete genomeporin B carbohydrate-selective OprB3e-1377
NC_011206:123791:1448971448971460841188Acidithiobacillus ferrooxidans ATCC 53993, complete genomeCarbohydrate-selective porin OprB2e-1274.3
NC_013716:357928:3784043784043797531350Citrobacter rodentium ICC168, complete genomeputative porin6e-1375.9
NC_015663:1869000:1889913188991318911991287Enterobacter aerogenes KCTC 2190 chromosome, complete genomecarbohydrate-selective porin OprB1e-0758.2
NC_016027:1647110:1691120169112016925171398Gluconacetobacter xylinus NBRC 3288, complete genomecarbohydrate-selective porin B2e-31137
NC_016027:376669:3803663803663820511686Gluconacetobacter xylinus NBRC 3288, complete genomecarbohydrate-selective porin B7e-55215
NC_016027:229180:2473502473502488491500Gluconacetobacter xylinus NBRC 3288, complete genomecarbohydrate-selective porin B7e-1065.9
NC_016027:1357659:1392920139292013946501731Gluconacetobacter xylinus NBRC 3288, complete genomecarbohydrate-selective porin B3e-55216
NC_011757:1067543:1078294107829410797151422Methylobacterium chloromethanicum CM4, complete genomeCarbohydrate-selective porin OprB3e-81302
NC_012811:139498:1502861502861515211236Methylobacterium extorquens AM1 megaplasmid, complete sequenceCarbohydrate-selective porin OprB5e-80298
NC_015379:2482901:2502434250243425037621329Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,porin B1e-1791.7
NC_014310:2017927:2032198203219820335681371Ralstonia solanacearum PSI07 megaplasmid, complete sequenceporin b (outer membrane) (glucose porin) transmembrane protein2e-1584.3
NC_017271:2789667:2791578279157827928551278Xanthomonas campestris pv. raphani 756C chromosome, completecarbohydrate-selective porin OprB3e-1790.5
NC_007508:3034718:3036632303663230379091278Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecarbohydrate-selective porin OprB1e-1585.1
NC_015709:1459838:1478074147807414795671494Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completecarbohydrate-selective porin OprB2e-1997.4