Pre_GI: BLASTP Hits

Some Help

Query: NC_012811:317308:317308 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 317308, End: 318765, Length: 1458

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014355:3248386:3248386324838632515623177Candidatus Nitrospira defluvii, complete genomeputative histidine kinase4e-0860.1
NC_014355:3435343:3456236345623634590102775Candidatus Nitrospira defluvii, complete genomeputative sensor histidine kinase3e-0653.9
NC_007298:2769525:2801178280117828026321455Dechloromonas aromatica RCB, complete genomeATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal8e-26118
NC_015565:1281397:1282736128273612842921557Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeintegral membrane sensor signal transduction histidine kinase6e-0652.8
NC_007517:3524715:3552237355223735536911455Geobacter metallireducens GS-15, complete genomehistidine kinase1e-0861.6
NC_011979:589874:6069826069826084301449Geobacter sp. FRC-32, complete genomehistidine kinase6e-1065.9
NC_002939:1021297:1036181103618110381481968Geobacter sulfurreducens PCA, complete genomesensor histidine kinase5e-1169.3
NC_009138:467268:4856314856314869411311Herminiimonas arsenicoxydans, complete genomeSignal transduction protein involved in AoxAB regulation (AoxS)6e-1789.4
NC_015711:8909256:8924105892410589252261122Myxococcus fulvus HW-1 chromosome, complete genomesensor histidine kinase5e-0652.8
NC_008095:7139056:7153870715387071549911122Myxococcus xanthus DK 1622, complete genomesensor histidine kinase4e-0653.1
NC_013235:422565:4287694287694301781410Nakamurella multipartita DSM 44233, complete genomehistidine kinase5e-0859.7
NC_008609:3672653:3700534370053437019761443Pelobacter propionicus DSM 2379, complete genomeintegral membrane sensor signal transduction histidine kinase7e-0962.4
NC_011662:386162:4375664375664390141449Thauera sp. MZ1T, complete genomeintegral membrane sensor signal transduction histidine kinase5e-25116
NC_011901:342777:3508543508543525631710Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehistidine kinase4e-0653.1
NC_009720:4367584:4367584436758443690351452Xanthobacter autotrophicus Py2, complete genomeintegral membrane sensor signal transduction histidine kinase6e-68258