Pre_GI: BLASTP Hits

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Query: NC_012811:317308:316442 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 316442, End: 317311, Length: 870

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007298:2769525:280262928026292803507879Dechloromonas aromatica RCB, complete genomePhosphonate-binding periplasmic protein6e-49194
NC_011662:386162:439011439011439913903Thauera sp. MZ1T, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-48192
NC_009138:467268:484573484573485478906Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein, putative ABC-type phosphate/phosphonate transport system2e-45182
NC_013939:1460142:147066214706621471519858Deferribacter desulfuricans SSM1, complete genomephosphate/phosphonate ABC transporter substrate-binding protein1e-25117
NC_007907:4692336:471060247106024711510909Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1995.5
NC_014761:417377:423091423091423978888Oceanithermus profundus DSM 14977 chromosome, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein5e-1168.6
NC_008312:7635217:763521776352177636134918Trichodesmium erythraeum IMS101, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein6e-1065.1
NC_010002:2933909:294487329448732945751879Delftia acidovorans SPH-1, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein6e-1065.1
NC_007973:3240866:325173132517313252609879Ralstonia metallidurans CH34 chromosome 1, complete sequencePhosphonate-binding periplasmic protein6e-1065.1
NC_008740:1414926:143625514362551437118864Marinobacter aquaeolei VT8, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein3e-0962.4
NC_012560:1965251:196687219668721967723852Azotobacter vinelandii DJ, complete genomePhosphonate ABC transporter, substrate-binding protein7e-0961.2
NC_021150:1965264:196688519668851967736852Azotobacter vinelandii CA6, complete genomePhosphonate ABC transporter, substrate-binding protein7e-0961.2
NC_007760:535825:541082541082541933852Anaeromyxobacter dehalogenans 2CP-C, complete genomeABC phosphonate-binding periplasmic protein2e-0757
NC_009439:3535152:353617835361783537029852Pseudomonas mendocina ymp, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein5e-0755.5
NC_015563:4773415:479700147970014797888888Delftia sp. Cs1-4 chromosome, complete genomephosphonate ABC transporter periplasmic phosphonate-binding protein5e-0755.1
NC_012811:1138897:114185211418521142724873Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative phosphonate transport system substrate-binding protein7e-0754.7
NC_008593:2281896:2288423228842322903271905Clostridium novyi NT, complete genomemethyl-accepting chemotaxis protein1e-0653.9
NC_009659:3384997:340802434080243408884861Janthinobacterium sp. Marseille chromosome, complete genomephosphonate ABC-type transport system substrate-binding protein2e-0653.1
NC_009138:3153576:317292331729233173783861Herminiimonas arsenicoxydans, complete genomephosphite transport system binding protein ptxB precursor2e-0653.1