Pre_GI: BLASTP Hits

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Query: NC_012811:1138897:1141852 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 1141852, End: 1142724, Length: 873

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015422:2078618:208943220894322090292861Alicycliphilus denitrificans K601 chromosome, complete genomephosphonate ABC transporter periplasmic phosphonate-binding protein7e-93340
NC_009659:3384997:340802434080243408884861Janthinobacterium sp. Marseille chromosome, complete genomephosphonate ABC-type transport system substrate-binding protein1e-91335
NC_009138:3153576:317292331729233173783861Herminiimonas arsenicoxydans, complete genomephosphite transport system binding protein ptxB precursor1e-91335
NC_010002:2933909:294487329448732945751879Delftia acidovorans SPH-1, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein9e-86316
NC_007973:3240866:325173132517313252609879Ralstonia metallidurans CH34 chromosome 1, complete sequencePhosphonate-binding periplasmic protein9e-86316
NC_009649:16907:358023580236665864Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,ABC-type phosphate/phosphonate transport system, periplasmic component3e-84311
NC_008740:1414926:143625514362551437118864Marinobacter aquaeolei VT8, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-82305
NC_015563:4773415:479700147970014797888888Delftia sp. Cs1-4 chromosome, complete genomephosphonate ABC transporter periplasmic phosphonate-binding protein2e-37156
NC_007760:535825:541082541082541933852Anaeromyxobacter dehalogenans 2CP-C, complete genomeABC phosphonate-binding periplasmic protein2e-34146
NC_007492:2771021:278739127873912788242852Pseudomonas fluorescens PfO-1, complete genomePhosphonate-binding periplasmic protein8e-32137
NC_009439:3535152:353617835361783537029852Pseudomonas mendocina ymp, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein1e-31137
NC_010501:4787963:480643248064324807286855Pseudomonas putida W619, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein4e-31135
NC_008312:7635217:763521776352177636134918Trichodesmium erythraeum IMS101, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein1e-30133
NC_021150:1965264:196688519668851967736852Azotobacter vinelandii CA6, complete genomePhosphonate ABC transporter, substrate-binding protein3e-29129
NC_012560:1965251:196687219668721967723852Azotobacter vinelandii DJ, complete genomePhosphonate ABC transporter, substrate-binding protein3e-29129
NC_018664:1:162511625117177927Clostridium acidurici 9a chromosome, complete genomeABC phosphonate transporter periplasmic phosphonate-binding protein3e-27122
NC_010334:3040589:305999230599923060846855Shewanella halifaxensis HAW-EB4, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein5e-25115
NC_013744:159861:177327177327178217891Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-24113
NC_007513:1126914:114927211492721150195924Synechococcus sp. CC9902, complete genomePhosphonate-binding periplasmic protein2e-22106
NC_005071:835005:855102855102856001900Prochlorococcus marinus str. MIT 9313, complete genomePutative phosphonate binding protein for ABC transporter3e-21102
NC_006395:217139:243801243801244676876Haloarcula marismortui ATCC 43049 plasmid pNG700, completephosphate ABC transporter phosphate-binding protein1e-20100
NC_009720:4367584:438554843855484386516969Xanthobacter autotrophicus Py2, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-1996.7
NC_007925:4294472:429698142969814297946966Rhodopseudomonas palustris BisB18, complete genomePhosphonate-binding periplasmic protein9e-1994.4
NC_008358:2574343:258071125807112581634924Hyphomonas neptunium ATCC 15444, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein1e-1894
NC_005070:1144777:116180611618061162726921Synechococcus sp. WH 8102, complete genomePutative phosphonate binding protein for ABC transporter3e-1892.8
NC_014727:186000:186002186002186943942Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,ABC phosphate/phosphonate transporter, periplasmic component2e-1790.1
NC_007907:5185510:524762252476225248572951Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1789.4
NC_011830:1288984:129906312990631300052990Desulfitobacterium hafniense DCB-2, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein5e-1788.6
NC_004193:375416:629961629961630923963Oceanobacillus iheyensis HTE831, complete genomealkylphosphonate ABC tranporter phosphate-binding protein5e-1788.6
NC_014118:1331164:134478813447881345765978Burkholderia sp. CCGE1002 chromosome chromosome 2, completephosphonate ABC transporter, periplasmic phosphonate binding protein4e-1685.5
NC_015425:2528549:2538760253876025406521893Clostridium botulinum BKT015925 chromosome, complete genomemethyl-accepting chemotaxis protein5e-1478.6
NC_010511:3233884:323388432338843234813930Methylobacterium sp. 4-46 chromosome, complete genomephosphonate ABC transporter periplasmic phosphonate binding protein9e-1477.8
NC_013173:2261396:228655022865502287473924Desulfomicrobium baculatum DSM 4028, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-1376.6
NC_004431:4867648:4882368488236848833841017Escherichia coli CFT073, complete genomePhosphonates-binding periplasmic protein precursor3e-1375.9
NC_002695:5164819:5178183517818351791991017Escherichia coli O157:H7 str. Sakai, complete genomeperiplasmic binding protein component of Pn transporter8e-1374.7
NC_002655:5194804:5208168520816852091841017Escherichia coli O157:H7 EDL933, complete genomeperiplasmic binding protein component of Pn transporter8e-1374.7
NC_011353:5240020:5253383525338352543991017Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephosphonate ABC transporter periplasmic phosphonate-binding protein8e-1374.7
NC_013008:5196080:5209444520944452104601017Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephosphonate ABC transporter substrate-binding protein8e-1374.7
NC_011742:4569683:4584403458440345854191017Escherichia coli S88 chromosome, complete genomephosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily1e-1274.3
NC_008563:4656000:4669875466987546708911017Escherichia coli APEC O1, complete genomePhnD, subunit of alkylphosphonate ABC transporter1e-1274.3
NC_009800:4332229:4347854434785443488701017Escherichia coli HS, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-1273.6
CP002185:4566150:4581774458177445827901017Escherichia coli W, complete genomephosphonate/organophosphate ester transporter subunit2e-1273.6
NC_009801:4643000:4655233465523346562491017Escherichia coli E24377A, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-1273.6
CU928145:4695932:4708082470808247090981017Escherichia coli 55989 chromosome, complete genomephosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily2e-1273.6
AC_000091:4313167:4328014432801443290301017Escherichia coli W3110 DNA, complete genomephosphonate/organophosphate ester transporter subunit2e-1273.6
NC_008253:4541915:4555934455593445569501017Escherichia coli 536, complete genomePhnD protein2e-1273.6
NC_011751:4795928:4809389480938948104051017Escherichia coli UMN026 chromosome, complete genomephosphonate/organophosphate ester ABC transporter periplasmic binding protein2e-1273.6
NC_012967:4289929:4302150430215043031661017Escherichia coli B str. REL606 chromosome, complete genomephosphonate/organophosphate ester transporter subunit2e-1273.6
NC_012947:4106031:4110942411094241119581017Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephosphonate ABC transporter substrate-binding protein2e-1273.6
NC_010498:4656716:4668784466878446698001017Escherichia coli SMS-3-5, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein2e-1273.6
NC_010468:4305105:4309617430961743106331017Escherichia coli ATCC 8739, complete genomephosphonate ABC transporter, periplasmic phosphonate binding protein2e-1273.6
NC_011750:4719477:4731623473162347326391017Escherichia coli IAI39 chromosome, complete genomephosphonate/organophosphate ester ABC transporter periplasmic binding protein2e-1273.6
NC_007606:3842708:3848776384877638497921017Shigella dysenteriae Sd197, complete genomeperiplasmic binding protein component of Pn transporter2e-1273.6
NC_007613:4156841:4172539417253941735551017Shigella boydii Sb227, complete genomeperiplasmic binding protein component of Pn transporter2e-1273.6
CU928160:4395156:4407196440719644082121017Escherichia coli IAI1 chromosome, complete genomephosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily2e-1273.6
NC_000913:4307471:4321359432135943223751017Escherichia coli K12, complete genomephosphonate/organophosphate ester transporter subunit2e-1273.6
NC_008593:2281896:2288423228842322903271905Clostridium novyi NT, complete genomemethyl-accepting chemotaxis protein1e-1273.6
NC_016822:4686971:4699075469907547000911017Shigella sonnei 53G, complete genomeperiplasmic binding protein component of Pn transporter2e-1273.6
NC_007384:4530000:4542148454214845431641017Shigella sonnei Ss046, complete genomeperiplasmic binding protein component of Pn transporter2e-1273.6
NC_016902:4431235:4436246443624644372621017Escherichia coli KO11FL chromosome, complete genomephosphonate ABC transporter substrate-binding protein2e-1273.6
NC_013364:5040268:5055937505593750569531017Escherichia coli O111:H- str. 11128, complete genomephosphonate/organophosphate ester transporter subunit PhnD2e-1273.6
NC_013353:5022196:5034417503441750354331017Escherichia coli O103:H2 str. 12009, complete genomephosphonate/organophosphate ester transporter subunit PhnD2e-1273.6
NC_012759:4247865:4260094426009442611101017Escherichia coli BW2952 chromosome, complete genomephosphonate/organophosphate ester transporter subunit2e-1273.6
NC_011741:4395156:4407196440719644082121017Escherichia coli IAI1 chromosome, complete genomephosphonate/organophosphate ester ABC transporter periplasmic-binding protein2e-1273.6
NC_011415:4582388:4594610459461045956261017Escherichia coli SE11 chromosome, complete genomephosphonate ABC transporter substrate binding component2e-1273.6
AP010958:5022196:5034417503441750354331017Escherichia coli O103:H2 str. 12009 DNA, complete genomephosphonate/organophosphate ester transporter subunit PhnD2e-1273.6
NC_010473:4409492:4421721442172144227371017Escherichia coli str. K-12 substr. DH10B, complete genomephosphonate/organophosphate ester transporter subunit; periplasmic binding component of ABC superfamily2e-1273.6
NC_011748:4695932:4708082470808247090981017Escherichia coli 55989, complete genomephosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily2e-1273.6
CP002516:4431235:4436246443624644372621017Escherichia coli KO11, complete genomephosphonate ABC transporter, periplasmic phosphonate binding protein2e-1273.6
NC_013941:5013695:5027049502704950280651017Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphonate ABC transporter substrate-binding protein5e-1271.6
NC_011662:386162:439011439011439913903Thauera sp. MZ1T, complete genomephosphonate ABC transporter, periplasmic phosphonate-binding protein1e-1067.4
NC_008800:3123495:312934531293453130274930Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative substrate-binding periplasmic transport protein2e-1067
NC_015224:1641819:165641516564151657344930Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative substrate-binding periplasmic transport protein1e-1067
NC_013939:1460142:147066214706621471519858Deferribacter desulfuricans SSM1, complete genomephosphate/phosphonate ABC transporter substrate-binding protein1e-1067
NC_010002:4930865:493205649320564932904849Delftia acidovorans SPH-1, complete genomehypothetical protein3e-1065.9
NC_007298:2769525:280262928026292803507879Dechloromonas aromatica RCB, complete genomePhosphonate-binding periplasmic protein1e-0963.9
NC_015690:4469775:454871045487104549528819Paenibacillus mucilaginosus KNP414 chromosome, complete genomephosphonate ABC transporter periplasmic phosphonate-binding protein1e-0963.5
NC_016935:4233223:430501443050144305832819Paenibacillus mucilaginosus 3016 chromosome, complete genomephosphonate ABC transporter substrate-binding protein1e-0963.5
NC_015391:504227:5164985164985175681071Carnobacterium sp. 17-4 chromosome, complete genomehypothetical protein3e-0962.4
NC_014758:1573023:159430815943081595153846Calditerrivibrio nitroreducens DSM 19672 chromosome, completehypothetical protein6e-0961.6
NC_011983:760113:760113760113761018906Agrobacterium radiobacter K84 chromosome 2, complete genomephosphonate ABC transporter9e-0960.8
NC_012811:317308:316442316442317311870Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein4e-0858.9
NC_007907:4692336:471060247106024711510909Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-0858.2
NC_013131:621366:636591636591637448858Catenulispora acidiphila DSM 44928, complete genomehypothetical protein1e-0757.4
NC_019902:831911:857637857637858536900Thioalkalivibrio nitratireducens DSM 14787, complete genomePhosphonate ABC transporter phosphate-binding periplasmic component2e-0756.6
NC_012731:1088321:111127411112741112200927Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomephosphonate ABC transport system periplasmic phosphonate-binding component4e-0755.5
NC_009138:467268:484573484573485478906Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein, putative ABC-type phosphate/phosphonate transport system6e-0755.1