Pre_GI: BLASTP Hits

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Query: NC_012808:3897751:3918106 Methylobacterium extorquens AM1, complete genome

Start: 3918106, End: 3918963, Length: 858

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:32996:485294852949293765Methylobacterium extorquens DM4, complete genomeregulatory protein, Crp2e-34145
NC_010505:5077162:510314351031435103874732Methylobacterium radiotolerans JCM 2831, complete genomecyclic nucleotide-binding protein4e-29128
NC_011894:7563668:756921275692127569952741Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family1e-28127
NC_011894:7563668:758337875833787584118741Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family4e-28125
NC_010511:7024412:703564070356407036380741Methylobacterium sp. 4-46 chromosome, complete genomeCrp/FNR family transcriptional regulator8e-28124
NC_011757:3540992:3571656357165635728101155Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family2e-27123
NC_010172:798923:8426678426678437971131Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding2e-27122
NC_010172:5447189:544936054493605450313954Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding1e-26120
NC_011757:5742290:574861057486105749509900Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family2e-26119
NC_012988:769981:8174538174538185831131Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator2e-26119
NC_010725:4035397:407820140782014078938738Methylobacterium populi BJ001, complete genometranscriptional regulator, Crp/Fnr family2e-25116
NC_011757:3540992:357466535746653575411747Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family3e-25115
NC_010172:57500:834578345784224768Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding4e-25115
NC_011757:39881:5967159671608251155Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family5e-25115
NC_010725:4035397:410845141084514109200750Methylobacterium populi BJ001, complete genometranscriptional regulator, Crp/Fnr family1e-22107
NC_011894:3268850:327233932723393273262924Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, Crp/Fnr family8e-23107
NC_011894:1499229:150931315093131510116804Methylobacterium nodulans ORS 2060, complete genomeputative transcriptional regulator, Crp/Fnr family1e-1687.4
NC_007494:714525:727571727571728302732Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencetranscriptional regulator, Crp-Fnr family3e-1685.9
NC_010172:798923:832740832740833504765Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding1e-1584
NC_009049:627000:627031627031627771741Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencecyclic nucleotide-binding protein2e-1583.6
NC_007493:546000:549413549413550153741Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceTranscriptional regulator, CRP/FNR family2e-1583.2
NC_012988:769981:806343806343807155813Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator5e-1581.6
NC_011149:1429523:144800414480041448756753Salmonella enterica subsp. enterica serovar Agona str. SL483,fumarate and nitrate reduction regulatory protein7e-0858.2
NC_011080:1750000:175072917507291751481753Salmonella enterica subsp. enterica serovar Newport str. SL254,fumarate and nitrate reduction regulatory protein7e-0858.2
NC_003197:1753663:175437417543741755126753Salmonella typhimurium LT2, complete genometranscriptional regulator7e-0858.2
NC_011094:1726000:172755417275541728306753Salmonella enterica subsp. enterica serovar Schwarzengrund strfumarate/nitrate reduction transcriptional regulator7e-0858.2
NC_016810:1709695:171122717112271711979753Salmonella enterica subsp. enterica serovar Typhimurium strfumarate and nitrate reduction regulatory protein7e-0858.2
NC_016856:1763640:176435117643511765103753Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sfumarate/nitrate reduction transcriptional regulator7e-0858.2
NC_016857:1709695:171122717112271711979753Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Fumarate and nitrate reduction regulatory protein7e-0858.2
NC_016860:1752000:175206517520651752817753Salmonella enterica subsp. enterica serovar Typhimurium strfumarate/nitrate reduction transcriptional regulator7e-0858.2
NC_017046:1709578:171111017111101711862753Salmonella enterica subsp. enterica serovar Typhimurium str. 798fumarate and nitrate reduction regulatory protein7e-0858.2
NC_006511:1273162:129164612916461292440795Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCfumarate and nitrate reduction regulatory protein7e-0858.2
NC_011147:1267005:128548912854891286283795Salmonella enterica subsp. enterica serovar Paratyphi A strfumarate/nitrate reduction transcriptional regulator7e-0858.2
NC_016863:1711832:171250117125011713295795Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1fumarate/nitrate reduction transcriptional regulator7e-0858.2
NC_012913:772641:781906781906782679774Aggregatibacter aphrophilus NJ8700, complete genometranscriptional activator protein anr9e-0857.8
NC_015761:1630000:164667116466711647465795Salmonella bongori NCTC 12419, complete genomefumarate and nitrate reduction regulatory protein8e-0857.8
NC_006905:1766000:176744717674471768292846Salmonella enterica subsp. enterica serovar Choleraesuis strtranscriptional regulation of aerobic, anaerobic respiration, osmotic balance (CRP family)8e-0857.8
NC_016513:1568401:158001815800181580791774Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completefumarate/nitrate reduction transcriptional regulator1e-0757.4
NC_013416:1246880:125844412584441259217774Aggregatibacter actinomycetemcomitans D11S-1, complete genometranscriptional activator protein anr1e-0757.4
NC_010688:2400471:242659224265922427353762Xanthomonas campestris pv. campestris, complete genomeTranscriptional regulator, Crp/Fnr family2e-0757
NC_004631:1623511:162500116250011625795795Salmonella enterica subsp. enterica serovar Typhi Ty2, completefumarate and nitrate reduction regulatory protein1e-0757
NC_003198:1336894:135538713553871356181795Salmonella enterica subsp. enterica serovar Typhi str. CT18,fumarate and nitrate reduction regulatory protein1e-0757
NC_007964:2152000:216817021681702168865696Nitrobacter hamburgensis X14, complete genometranscriptional regulator, Crp/Fnr family3e-0756.2
NC_008258:1873805:187380518738051874557753Shigella flexneri 5 str. 8401, complete genomeFumarate and nitrate reduction Regulatory protein3e-0756.2
NC_009792:1345500:136427313642731365103831Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-0756.2
NC_009092:2282437:230490623049062305655750Shewanella loihica PV-4, complete genometranscriptional regulator, Crp/Fnr family3e-0755.8
NC_014541:2122788:214288821428882143640753Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, Crp/Fnr family3e-0755.8
NC_003078:671000:716513716513717244732Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative transcriptional regulator protein7e-0754.7
NC_012214:1974500:201414020141402014895756Erwinia pyrifoliae Ep1/96, complete genomeFumarate and nitrate reduction regulatory protein1e-0654.3
NC_015675:3046852:306183530618353062554720Mesorhizobium opportunistum WSM2075 chromosome, complete genomeCrp/Fnr family transcriptional regulator2e-0653.1