Pre_GI: BLASTP Hits

Some Help

Query: NC_012808:3897751:3915639 Methylobacterium extorquens AM1, complete genome

Start: 3915639, End: 3916493, Length: 855

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:347500:3594083594083604331026Methylobacterium extorquens DM4, complete genomehistone deacetylase3e-150531
NC_010511:1074557:111043111104311111411981Methylobacterium sp. 4-46 chromosome, complete genomehistone deacetylase superfamily protein3e-102371
NC_017059:1727095:174218717421871743116930Rhodospirillum photometricum DSM 122, complete genomeHistone deacetylase superfamily3e-63242
NC_015723:1486000:151886415188641519808945Cupriavidus necator N-1 chromosome 2, complete sequencehistone deacetylase superfamily protein1e-59229
NC_003911:253400:270724270724271650927Silicibacter pomeroyi DSS-3, complete genomehistone deacetylase family protein1e-55216
NC_008340:362000:379529379529380452924Alkalilimnicola ehrlichei MLHE-1, complete genomehistone deacetylase superfamily9e-55213
NC_015966:1040562:1040562104056210415931032Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomehistone deacetylase superfamily2e-54212
NC_008344:1899317:192141019214101922330921Nitrosomonas eutropha C91, complete genomehistone deacetylase superfamily1e-53210
NC_007298:2689731:271313327131332714098966Dechloromonas aromatica RCB, complete genomeHistone deacetylase superfamily3e-53208
NC_013889:1439326:145245014524501453373924Thioalkalivibrio sp. K90mix chromosome, complete genomeHistone deacetylase3e-52205
NC_017515:1653306:1655765165576516568741110Neisseria meningitidis M04-240196 chromosome, complete genomehypothetical protein2e-48192
NC_015388:2499187:250392925039292504879951Desulfobacca acetoxidans DSM 11109 chromosome, complete genomehistone deacetylase superfamily3e-46185
NC_013440:5543667:5557259555725955583381080Haliangium ochraceum DSM 14365, complete genomeHistone deacetylase3e-46185
NC_020304:1222000:1223266122326612243301065Desulfocapsa sulfexigens DSM 10523, complete genomedeacetylase, histone deacetylase/acetoin utilization protein1e-43176
NC_015185:485866:512685512685513590906Desulfurobacterium thermolithotrophum DSM 11699 chromosome,histone deacetylase superfamily3e-43175
NC_009455:273519:3179703179703189951026Dehalococcoides sp. BAV1 chromosome, complete genomehistone deacetylase superfamily protein1e-41170
NC_018691:359695:3657843657843668931110Alcanivorax dieselolei B5 chromosome, complete genomeHistone deacetylase superfamily3e-41168
NC_006138:2683545:2696232269623226972571026Desulfotalea psychrophila LSv54, complete genomehypothetical protein3e-40165
NC_010475:2896000:291428129142812915198918Synechococcus sp. PCC 7002, complete genomeacetylpolyamine aminohydrolase9e-40164
NC_011126:779500:806626806626807555930Hydrogenobaculum sp. Y04AAS1, complete genomehistone deacetylase superfamily5e-39161
NC_009925:5479613:548571454857145486640927Acaryochloris marina MBIC11017, complete genomehistone deacetylase family protein6e-39160
NC_019964:2816990:2816990281699028180031014Halovivax ruber XH-70, complete genomedeacetylase, histone deacetylase/acetoin utilization protein7e-39160
NC_020411:765500:793168793168794097930Hydrogenobaculum sp. HO, complete genomehistone deacetylase superfamily8e-39160
NC_015587:765500:793196793196794125930Hydrogenobaculum sp. SHO chromosome, complete genomehistone deacetylase superfamily8e-39160
NC_015557:765500:793141793141794070930Hydrogenobaculum sp. 3684 chromosome, complete genomehistone deacetylase superfamily8e-39160
NC_007520:1940120:1955929195592919570681140Thiomicrospira crunogena XCL-2, complete genomeHistone deacetylase superfamily2e-38159
NC_007796:817404:826338826338827306969Methanospirillum hungatei JF-1, complete genomehistone deacetylase superfamily8e-38157
NC_019962:3331849:3349060334906033500941035Natrinema pellirubrum DSM 15624, complete genomedeacetylase, histone deacetylase/acetoin utilization protein2e-37156
NC_019673:3726519:3732221373222137338671647Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-37155
NC_008463:1293079:1293079129307912942211143Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative deacetylase4e-37155
NC_010338:588000:6052396052396063781140Caulobacter sp. K31, complete genomehistone deacetylase superfamily6e-37154
NC_007510:2284000:2288854228885422899631110Burkholderia sp. 383 chromosome 1, complete sequenceHistone deacetylase superfamily2e-36152
NC_006396:2025500:2048019204801920490261008Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceacetoin utilization protein4e-34145
NC_006569:69939:9665796657976911035Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencehistone deacetylase/AcuC/AphA family protein4e-33142
NC_007760:3948730:395238439523843953358975Anaeromyxobacter dehalogenans 2CP-C, complete genomeHistone deacetylase superfamily7e-33140
NC_014657:914071:9348619348619361771317Caldicellulosiruptor owensensis OL chromosome, complete genomehistone deacetylase superfamily5e-32138
NC_000909:467607:4703264703264713571032Methanocaldococcus jannaschii DSM 2661, complete genomeacetylpolyamine aminohydrolase (aphA)3e-31135
NC_012785:20454:295752957530540966Kosmotoga olearia TBF 19.5.1, complete genomeHistone deacetylase1e-30134
NC_016051:1849905:1871525187152518725291005Thermococcus sp. AM4 chromosome, complete genomehistone deacetylase1e-30133
NC_015680:369777:3840903840903850971008Pyrococcus yayanosii CH1 chromosome, complete genomehistone deacetylase3e-30132
NC_013385:1007616:1025036102503610263881353Ammonifex degensii KC4, complete genomeHistone deacetylase1e-29130
NC_011768:3854455:3854455385445538557681314Desulfatibacillum alkenivorans AK-01, complete genomehistone deacetylase superfamily1e-29130
NC_009380:1663545:1663545166354516647261182Salinispora tropica CNB-440 chromosome, complete genomehistone deacetylase superfamily protein3e-28125
NC_000854:50407:6537165371664711101Aeropyrum pernix K1, complete genomehypothetical protein8e-28124
NC_010337:2339056:2354840235484023560121173Heliobacterium modesticaldum Ice1, complete genomeacetoin utilization protein, subunit c6e-27121
NC_007181:163640:1753931753931764331041Sulfolobus acidocaldarius DSM 639, complete genomehistone deacetylase2e-26119
NC_014221:3137952:3136753313675331379551203Truepera radiovictrix DSM 17093 chromosome, complete genomeHistone deacetylase5e-25115
NC_014639:2452286:2473919247391924750881170Bacillus atrophaeus 1942 chromosome, complete genomeprotein deacetylase9e-25114
CP002207:2452286:2473919247391924750881170Bacillus atrophaeus 1942, complete genomeprotein deacetylase9e-25114
UCMB5137:2418403:2439887243988724410561170Bacillus atrophaeus UCMB-5137protein deacetylase9e-25114
NC_014299:218252:2320602320602331511092Halalkalicoccus jeotgali B3 plasmid 2, complete sequencehistone deacetylase superfamily protein7e-24111
NC_014532:1191267:1212351121235112133911041Halomonas elongata DSM 2581, complete genomehistone deacetylase superfamily8e-24110
NC_009328:2808897:2830063283006328312321170Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeacetoin utilization protein AcuC1e-23110
NC_013411:681907:6948196948196959881170Geobacillus sp. Y412MC61, complete genomeHistone deacetylase8e-23107
NC_014915:2900209:2906569290656929077381170Geobacillus sp. Y412MC52 chromosome, complete genomeHistone deacetylase8e-23107
NC_002678:5714000:5727449572744957284891041Mesorhizobium loti MAFF303099, complete genomeacetylpolyamine aminohydrolase8e-23107
NC_017353:1235095:1254394125439412555511158Staphylococcus lugdunensis N920143, complete genomehistone deacetylase family protein5e-22105
NC_015379:6714545:6731716673171667327471032Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative acetylpolyamine aminohydrolase1e-21103
NC_015587:558180:5660415660415671801140Hydrogenobaculum sp. SHO chromosome, complete genomeHistone deacetylase1e-21103
NC_015557:558127:5659885659885671271140Hydrogenobaculum sp. 3684 chromosome, complete genomeHistone deacetylase1e-21103
NC_020411:558153:5660145660145671531140Hydrogenobaculum sp. HO, complete genomeHistone deacetylase1e-21103
NC_009439:101174:1231501231501241781029Pseudomonas mendocina ymp, complete genomehistone deacetylase superfamily protein2e-21102
NC_020304:129321:1313201313201335782259Desulfocapsa sulfexigens DSM 10523, complete genomedeacetylase, histone deacetylase/acetoin utilization protein5e-21101
NC_011126:555483:5771185771185782571140Hydrogenobaculum sp. Y04AAS1, complete genomehistone deacetylase superfamily2e-20100
NC_018750:3481476:3487735348773534888891155Streptomyces venezuelae ATCC 10712, complete genomeNAD-independent protein deacetylase AcuC3e-1995.9
NC_009256:1282793:1311687131168713127091023Burkholderia vietnamiensis G4 chromosome 1, complete sequencehistone deacetylase superfamily protein1e-1894
NC_015518:1518047:1534527153452715355461020Acidianus hospitalis W1 chromosome, complete genomehistone deacetylase superfamily protein2e-1893.6
NC_009483:2640403:2658863265886326600201158Geobacter uraniireducens Rf4 chromosome, complete genomehistone deacetylase superfamily protein2e-1893.2
NC_015379:3570658:3583095358309535841291035Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative acetylpolyamine aminohydrolase8e-1787.8
NC_015435:607345:6073456073456083731029Metallosphaera cuprina Ar-4 chromosome, complete genomehistone deacetylase superfamily protein2e-1582.8
NC_000918:707801:7088327088327099591128Aquifex aeolicus VF5, complete genomeacetoin utilization protein3e-1582.4
NC_003106:1879441:189311118931111894109999Sulfolobus tokodaii str. 7, complete genomehypothetical acetoin utilization acuC protein9e-1580.9
NC_015416:2692536:271254527125452713330786Methanosaeta concilii GP-6 chromosome, complete genomehistone deacetylase family protein1e-1480.5
NC_012622:1010210:1030599103059910316361038Sulfolobus islandicus Y.G.57.14 chromosome, complete genomehistone deacetylase superfamily protein2e-1479.7
NC_013173:1231213:1251678125167812534261749Desulfomicrobium baculatum DSM 4028, complete genomehistone deacetylase superfamily2e-1480.1
NC_009484:775828:7807527807527818251074Acidiphilium cryptum JF-5 chromosome, complete genomehistone deacetylase superfamily protein1e-1377.4
NC_006576:161112:177381177381178295915Synechococcus elongatus PCC 6301, complete genomesimilar to histone deacetylase/AcuC/AphA family protein1e-1273.9
NC_007604:1442500:144250414425041443418915Synechococcus elongatus PCC 7942, complete genomehistone deacetylase/AcuC/AphA family protein-like1e-1273.9
NC_008554:484267:486487486487487233747Syntrophobacter fumaroxidans MPOB, complete genomehistone deacetylase superfamily2e-1273.2
NC_007645:6647500:667606266760626676982921Hahella chejuensis KCTC 2396, complete genomeDeacetylases, including yeast histone deacetylase and acetoin utilization protein3e-1272.4
NC_018644:516157:529571529571530467897Alpha proteobacterium HIMB59 chromosome, complete genomehistone deacetylase family protein4e-1168.6
NC_008322:2983951:300325730032573004159903Shewanella sp. MR-7, complete genomehistone deacetylase superfamily1e-0964.3
NC_014010:484000:485524485524486438915Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehistone deacetylase superfamily2e-0963.2
NC_005070:837567:840554840554841525972Synechococcus sp. WH 8102, complete genomePutative histone deacetylase/AcuC/AphA family protein2e-0962.8
NC_007513:1388641:141790814179081418825918Synechococcus sp. CC9902, complete genomeputative histone deacetylase/AcuC/AphA family protein3e-0962.8
NC_008321:2922000:294257429425742943476903Shewanella sp. MR-4, complete genomehistone deacetylase superfamily4e-0962.4
NC_008577:3125675:314309731430973143999903Shewanella sp. ANA-3 chromosome 1, complete sequencehistone deacetylase superfamily4e-0962.4
NC_020908:823589:826925826925827830906Octadecabacter arcticus 238, complete genomeputative deacetylase5e-0961.6
NC_020911:1549065:156300815630081563913906Octadecabacter antarcticus 307, complete genomeputative deacetylase2e-0859.7
NC_009092:2902171:292661929266192927521903Shewanella loihica PV-4, complete genomehistone deacetylase superfamily5e-0858.5
NC_014008:3296708:331176733117673312675909Coraliomargarita akajimensis DSM 45221 chromosome, complete genomehistone deacetylase superfamily8e-0857.8