Pre_GI: BLASTP Hits

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Query: NC_012808:3897751:3906551 Methylobacterium extorquens AM1, complete genome

Start: 3906551, End: 3907027, Length: 477

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:4387735:439601743960174396493477Methylobacterium extorquens DM4, complete genomeRrf2 family transcriptional regulator3e-59226
NC_006510:1731939:176516917651691765612444Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-2097.8
NC_006513:1695487:171563317156331716094462Azoarcus sp. EbN1, complete genomepredicted transcriptional regulator9e-1889.4
NC_015634:959396:984111984111984545435Bacillus coagulans 2-6 chromosome, complete genomeBadM/Rrf2 family transcriptional regulator5e-1683.6
NC_011999:728353:735879735879736295417Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein3e-1477.8
NC_009720:3377071:337865933786593379108450Xanthobacter autotrophicus Py2, complete genomeBadM/Rrf2 family transcriptional regulator8e-1372.8
NC_013446:2761000:276345027634502763896447Comamonas testosteroni CNB-2, complete genometranscriptional regulator, BadM/Rrf2 family2e-1271.6
NC_007940:669143:672492672492672902411Rickettsia bellii RML369-C, complete genomePutative transcriptional regulator3e-1270.9
NC_009883:641491:644840644840645289450Rickettsia bellii OSU 85-389, complete genomePutative transcriptional regulator3e-1270.9
NC_009254:745706:749444749444749956513Burkholderia vietnamiensis G4 chromosome 3, complete sequenceBadM/Rrf2 family transcriptional regulator7e-1269.7
NC_008209:761487:763317763317763787471Roseobacter denitrificans OCh 114, complete genomehypothetical protein1e-1168.9
NC_014394:808734:810507810507810938432Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family1e-1168.9
NC_015866:767790:779257779257779685429Rickettsia heilongjiangensis 054 chromosome, complete genomePutative transcriptional regulator3e-1064.3
NC_016050:771752:783334783334783762429Rickettsia japonica YH, complete genomeputative transcriptional regulator3e-1064.3
NC_017059:2922000:294185829418582942292435Rhodospirillum photometricum DSM 122, complete genometranscriptional regulator7e-1063.2
NC_008577:44184:566305663057085456Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, BadM/Rrf2 family1e-0962.4
NC_013422:991500:997874997874998326453Halothiobacillus neapolitanus c2, complete genometranscriptional regulator, BadM/Rrf2 family8e-0959.3
NC_010263:771901:783536783536783964429Rickettsia rickettsii str. Iowa, complete genomeRrf2 family protein3e-0857.8
NC_016909:771542:783176783176783604429Rickettsia rickettsii str. Arizona chromosome, complete genomeRrf2 family protein3e-0857.8
NC_016911:771916:783551783551783979429Rickettsia rickettsii str. Hauke chromosome, complete genomeRrf2 family protein3e-0857.8
NC_016914:772025:783660783660784088429Rickettsia rickettsii str. Hino chromosome, complete genomeRrf2 family protein3e-0857.8
NC_006513:286549:309579309579310214636Azoarcus sp. EbN1, complete genomepredicted transcriptional regulator, rf2 family3e-0754.3
NC_017167:2259413:226118022611802261467288Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1AsnC family transcriptional regulator8e-0649.7