Pre_GI: BLASTP Hits

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Query: NC_012808:3897751:3899875 Methylobacterium extorquens AM1, complete genome

Start: 3899875, End: 3901479, Length: 1605

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012808:1979000:199122419912241992111888Methylobacterium extorquens AM1, complete genomeadenine-specific DNA methyltransferase5e-121435
NC_013722:218847:222836222836223684849Xanthomonas albilineans, complete genomeputative n6 adenine-specific dna methyltransferase protein3e-59229
NC_012779:3016327:303101830310183031824807Edwardsiella ictaluri 93-146, complete genomeDNA adenine methyltransferase1e-52207
NC_012724:1892000:189367518936751894580906Burkholderia glumae BGR1 chromosome 1, complete genomeD12 class N6 adenine-specific DNA methyltransferase2e-52207
NC_009656:4527457:458478545847854585675891Pseudomonas aeruginosa PA7 chromosome, complete genomeDNA adenine methyltransferase8e-51202
NC_010002:5143869:515492951549295155789861Delftia acidovorans SPH-1, complete genomeD12 class N6 adenine-specific DNA methyltransferase2e-50201
NC_018080:5091772:510590551059055106795891Pseudomonas aeruginosa DK2 chromosome, complete genomeDNA adenine methyltransferase1e-50201
NC_012491:3736167:375185137518513752666816Brevibacillus brevis NBRC 100599, complete genomeputative methyltransferase7e-39162
NC_020244:650109:650109650109650933825Bacillus subtilis XF-1, complete genomehypothetical protein7e-39162
NC_013720:5769910:579898757989875799883897Pirellula staleyi DSM 6068, complete genomeD12 class N6 adenine-specific DNA methyltransferase9e-39161
NC_020272:2748733:278646427864642787288825Bacillus amyloliquefaciens IT-45, complete genomemethyltransferase1e-38161
NC_014836:1606587:1621088162108816221311044Desulfurispirillum indicum S5 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase3e-38160
NC_020272:1311932:133077813307781331602825Bacillus amyloliquefaciens IT-45, complete genomemethyltransferase3e-38159
NC_014376:787460:815901815901816695795Clostridium saccharolyticum WM1 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase1e-36154
NC_013222:3098409:311612231161223116817696Robiginitalea biformata HTCC2501, complete genomeputative methyltransferase3e-36153
NC_017167:1648913:170173717017371702615879Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1D12 class N6 adenine-specific DNA methyltransferase3e-35150
NC_016894:3988180:399678039967803997607828Acetobacterium woodii DSM 1030 chromosome, complete genomephage-like N6 adenine-specific DNA methylase3e-35150
NC_013205:1187812:120609912060991206932834Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,D12 class N6 adenine-specific DNA methyltransferase3e-35150
NC_009523:907775:920981920981921856876Roseiflexus sp. RS-1 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase7e-34145
NC_003210:2380419:239181323918132392625813Listeria monocytogenes EGD-e, complete genomehypothetical protein5e-30132
NC_003212:57061:862908629087102813Listeria innocua Clip11262, complete genomehypothetical protein5e-30132
NC_014220:2037560:205483220548322055653822Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase3e-26120
NC_009089:1093832:110755711075571108363807Clostridium difficile 630, complete genomephage modification methylase4e-25116
NC_014483:3339926:336025233602523361064813Paenibacillus polymyxa E681 chromosome, complete genomeSite-specific DNA methylase7e-22105
NC_019842:1172944:118561811856181186442825Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Site-specific DNA methylase3e-21103
NC_015381:3091500:311175631117563112541786Burkholderia gladioli BSR3 chromosome 1, complete sequencegp279e-21102
NC_011206:1233985:124016812401681241058891Acidithiobacillus ferrooxidans ATCC 53993, complete genomeD12 class N6 adenine-specific DNA methyltransferase9e-21102
NC_011206:123791:128217128217129107891Acidithiobacillus ferrooxidans ATCC 53993, complete genomeD12 class N6 adenine-specific DNA methyltransferase9e-21102
NC_012030:81837:104041104041104895855Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completeD12 class N6 adenine-specific DNA methyltransferase8e-21102
NC_005773:2177184:219452521945252195319795Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative adenine modification methytransferase5e-21102
NC_007434:1809946:181917118191711819959789Burkholderia pseudomallei 1710b chromosome I, complete sequencegp271e-20101
NC_015381:2109500:211653721165372117322786Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA adenine methylase2e-20101
NC_005773:5636606:565239656523965653190795Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH06, putative adenine modification methytransferase3e-20100
NC_015381:3457784:347117134711713471956786Burkholderia gladioli BSR3 chromosome 1, complete sequencegp272e-20100
NC_005773:2177184:218385621838562184650795Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative adenine modification methytransferase2e-20100
NC_007651:2166000:216831721683172169288972Burkholderia thailandensis E264 chromosome I, complete sequenceDNA adenine methylase2e-20100
NC_019964:2080444:209454320945432095421879Halovivax ruber XH-70, complete genomesite-specific DNA methylase5e-2099.8
NC_012724:3070386:308106930810693081809741Burkholderia glumae BGR1 chromosome 1, complete genomegp271e-1998.6
NC_004578:3817330:383004238300423830836795Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA adenine methylase, putative1e-1998.2
NC_014972:2771902:278007427800742780835762Desulfobulbus propionicus DSM 2032 chromosome, complete genomeDNA adenine methylase3e-1997.1
NC_015666:3606053:363075136307513631614864Halopiger xanaduensis SH-6 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase3e-1997.1
NC_008390:2018201:203368920336892034477789Burkholderia cepacia AMMD chromosome 1, complete sequenceD12 class N6 adenine-specific DNA methyltransferase4e-1996.7
NC_016830:4999946:501431450143145015108795Pseudomonas fluorescens F113 chromosome, complete genomeprophage adenine modification methytransferase7e-1995.9
NC_020209:3262000:327234632723463273140795Pseudomonas poae RE*1-1-14, complete genomeD12 class N6 adenine-specific DNA methyltransferase1e-1895.1
NC_015850:1279372:129195212919521292872921Acidithiobacillus caldus SM-1 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase1e-1895.1
NC_007963:1582089:158968915896891590450762Chromohalobacter salexigens DSM 3043, complete genomeDNA adenine methylase1e-1895.1
NC_012724:2202173:221359022135902214381792Burkholderia glumae BGR1 chromosome 1, complete genomeGp2723e-1894
NC_019792:153661:157406157406158293888Natronobacterium gregoryi SP2 chromosome, complete genomesite-specific DNA methylase7e-1892.4
NC_017986:4124335:413120141312014131971771Pseudomonas putida ND6 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase3e-1790.5
NC_015381:1202061:121846112184611219246786Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA adenine methylase5e-1789.7
NC_015733:1976752:198370119837011984471771Pseudomonas putida S16 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase2e-1687.8
NC_015856:1152021:117670911767091177263555Collimonas fungivorans Ter331 chromosome, complete genomeprophage PSPPH02 adenine modification methytransferase5e-1686.3
NC_009850:1651410:165650816565081657290783Arcobacter butzleri RM4018, complete genomeN6 adenine-specific DNA methyltransferase, D12 class8e-1685.5
NC_002927:3827211:383460238346023835393792Bordetella bronchiseptica RB50, complete genomemodification methylase9e-1685.5
NC_012808:1979000:199210819921081992740633Methylobacterium extorquens AM1, complete genomehypothetical protein1e-1585.1
NC_012559:1663214:167124416712441672011768Laribacter hongkongensis HLHK9, complete genomeProbable methyltransferase2e-1584.3
NC_012779:3016327:301769130176913018449759Edwardsiella ictaluri 93-146, complete genomeDNA adenine methylase2e-1481.3
NC_007907:2534462:254911925491192549703585Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1481.3
NC_009706:1972000:197993219799321980759828Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein2e-1378.2
NC_009706:2023912:204826520482652049092828Clostridium kluyveri DSM 555 chromosome, complete genomeDNA methylase2e-1378.2
NC_011837:1969144:197976819797681980595828Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-1378.2
NC_009706:3341250:334939933493993350232834Clostridium kluyveri DSM 555 chromosome, complete genomeDNA methylase2e-1378.2
NC_011837:3272752:328090132809013281734834Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-1378.2
NC_013202:418500:445975445975446829855Halomicrobium mukohataei DSM 12286, complete genomeD12 class N6 adenine-specific DNA methyltransferase5e-1376.6
NC_007626:506532:5114845114845126501167Magnetospirillum magneticum AMB-1, complete genomeSite-specific DNA methylase8e-1375.9
NS_000195:219785:239076239076239891816Candidatus Cloacamonas acidaminovoransN6 adenine-specific DNA methyltransferase, D12 class3e-1273.9
NC_015177:1131173:113249411324941133324831Pedobacter saltans DSM 12145 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase3e-1273.6
NC_009615:1001744:100387710038771004686810Parabacteroides distasonis ATCC 8503 chromosome, complete genomemethyltransferase1e-1171.6
NC_010161:1324381:134371113437111344532822Bartonella tribocorum CIP 105476, complete genomephage-related modification methylase4e-1170.1
NC_010161:1949637:196911019691101969931822Bartonella tribocorum CIP 105476, complete genomephage-related modification methylase4e-1170.1
NC_010161:1914000:193310719331071933928822Bartonella tribocorum CIP 105476, complete genomephage-related modification methylase4e-1170.1
NS_000195:526983:557148557148557969822Candidatus Cloacamonas acidaminovoransputative N6 adenine-specific DNA methyltransferase, D12 class2e-1068.2
NC_020301:669000:707879707879708697819Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeadenine-specific DNA methyltransferase2e-1067.8
NC_010546:4923496:101041010411072969Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceputative site-specific DNA-methyltransferase3e-1067
NC_012724:1308000:131762613176261317976351Burkholderia glumae BGR1 chromosome 1, complete genomeD12 class N6 adenine-specific DNA methyltransferase1e-0862
NC_011958:923789:942015942015942821807Rhodobacter sphaeroides KD131 chromosome 2, complete genomeD12 class N6 adenine-specific DNA methyltransferase5e-0860.1
NC_007494:739403:744384744384745190807Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative adenine-specific DNA methyltransferase1e-0758.9
NC_009050:427000:427065427065427871807Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceD12 class N6 adenine-specific DNA methyltransferase1e-0758.5
NC_007493:628243:646227646227647033807Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceN6 adenine-specific DNA methyltransferase, D12 class1e-0758.5
NC_016591:202342:218847218847219551705Burkholderia sp. YI23 plasmid byi_2p, complete sequencephage DNA methylase2e-0758.2
NC_011989:2549252:256063425606342561389756Agrobacterium vitis S4 chromosome 1, complete sequenceSite-specific DNA methylase2e-0758.2
NC_011963:325806:341174341174341953780Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceD12 class N6 adenine-specific DNA methyltransferase3e-0757.4
NC_011963:3073283:308649130864913087270780Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceD12 class N6 adenine-specific DNA methyltransferase3e-0757
NC_015572:4916430:491857849185784919255678Methylomonas methanica MC09 chromosome, complete genomephage DNA methylase3e-0757
NC_007493:207932:223468223468224274807Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencePutative N-6 adenine-specific DNA methylase9e-0755.8
NC_009051:1455183:147118414711841472035852Methanoculleus marisnigri JR1, complete genomeDNA adenine methylase8e-0755.8
NC_007494:867901:889223889223890029807Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceAdenine-specific DNA methyltransferase2e-0654.3
NC_019902:27574:292872928729931645Thioalkalivibrio nitratireducens DSM 14787, complete genomephage DNA methylase3e-0653.9
NC_014364:2111685:212945021294502129836387Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeD12 class N6 adenine-specific DNA methyltransferase5e-0653.1
NC_011963:1482042:150132215013221502023702Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceD12 class N6 adenine-specific DNA methyltransferase5e-0653.1