Pre_GI: BLASTP Hits

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Query: NC_012808:2886282:2893134 Methylobacterium extorquens AM1, complete genome

Start: 2893134, End: 2893478, Length: 345

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014310:1822751:186675518667551867099345Ralstonia solanacearum PSI07 megaplasmid, complete sequencesmall multidrug resistance protein3e-25114
NC_017506:971482:974058974058974390333Marinobacter adhaerens HP15 chromosome, complete genomesmall multidrug resistance protein5e-1683.2
NC_014366:1814000:181793518179351818267333Gamma proteobacterium HdN1, complete genomeQuaternary ammonium compound resistance protein5e-1682.8
NC_014306:1981956:199145019914501991785336Erwinia billingiae Eb661, complete genomehypothetical protein7e-1682.4
NC_010519:1963256:198089919808991981231333Haemophilus somnus 2336 chromosome, complete genomesmall multidrug resistance protein4e-1580.1
NC_006856:26438:392213922139553333Salmonella enterica subsp. enterica serovar Choleraesuis strquaternary ammonium compound resistance protein4e-1580.1
NC_008800:2298000:229938022993802299712333Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,quaternary ammonium compound-resistance protein1e-1478.2
NC_009727:766000:784726784726785052327Coxiella burnetii Dugway 7E9-12, complete genomequaternary ammonium compound-resistance protein qacE2e-1477.8
NC_016641:1369424:137771513777151378086372Paenibacillus terrae HPL-003 chromosome, complete genomemembrane transporter6e-1475.9
NC_014532:3479674:350205835020583502387330Halomonas elongata DSM 2581, complete genomeK03297 small multidrug resistance protein, SMR family2e-1374.3
NC_013410:1491000:150255015025501502882333Fibrobacter succinogenes subsp. succinogenes S85 chromosome,small multidrug resistance protein3e-1373.9
NC_009952:1680682:170033917003391700668330Dinoroseobacter shibae DFL 12, complete genomeefflux-multidrug resistance protein3e-1373.6
NC_011353:2957962:297054029705402970872333Escherichia coli O157:H7 str. EC4115 chromosome, complete genomemultidrug efflux protein6e-1372.8
NC_013008:2910567:292541129254112925743333Escherichia coli O157:H7 str. TW14359 chromosome, complete genomemultidrug efflux protein6e-1372.8
NC_013941:699286:707659707659707991333Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeEmrE SMR transporter6e-1372.8
NC_020272:20435:252212522125604384Bacillus amyloliquefaciens IT-45, complete genomeSpermidine export protein mdtJ1e-1271.6
CU928145:824367:831068831068831400333Escherichia coli 55989 chromosome, complete genomemultidrug resistance protein; DLP12 prophage1e-1271.6
NC_011748:824367:831068831068831400333Escherichia coli 55989, complete genomemultidrug efflux protein1e-1271.6
NC_011415:600375:620270620270620602333Escherichia coli SE11 chromosome, complete genomemultidrug efflux protein1e-1271.6
NC_000913:558920:567538567538567870333Escherichia coli K12, complete genomemultidrug efflux protein1e-1271.6
NC_010473:498252:506870506870507202333Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; multidrug resistance protein1e-1271.6
AC_000091:558920:567538567538567870333Escherichia coli W3110 DNA, complete genomemultidrug resistance protein1e-1271.6
NC_012759:461680:470298470298470630333Escherichia coli BW2952 chromosome, complete genomemultidrug efflux protein1e-1271.6
NC_017188:419000:432818432818433180363Bacillus amyloliquefaciens TA208 chromosome, complete genomeYvaE2e-1271.2
NC_017190:424000:437491437491437853363Bacillus amyloliquefaciens LL3 chromosome, complete genomesmall multidrug resistance protein, SMR family2e-1271.2
NC_017191:425000:438728438728439090363Bacillus amyloliquefaciens XH7 chromosome, complete genomemetabolite-efflux transporter2e-1271.2
NC_014019:3543389:356575035657503566112363Bacillus megaterium QM B1551 chromosome, complete genomemultidrug resistance protein, SMR family2e-1270.9
NC_014551:442135:455457455457455807351Bacillus amyloliquefaciens DSM 7, complete genomemetabolite-efflux transporter2e-1270.9
NC_010410:3606826:365555836555583655905348Acinetobacter baumannii AYE, complete genomeethidium bromide resistance protein (E1 protein)6e-1269.7
NC_009651:19909:349083490835255348Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,QacEdelta1; small multidrug resistance protein6e-1269.7
NC_011751:4992500:499926549992654999612348Escherichia coli UMN026 chromosome, complete genomeputative ethidium bromide resistance protein6e-1269.7
NC_010410:3606826:365145036514503651797348Acinetobacter baumannii AYE, complete genomeethidium bromide resistance protein (E1 protein)6e-1269.7
NC_010410:3606826:362098136209813621328348Acinetobacter baumannii AYE, complete genomeethidium bromide resistance protein (E1 protein)6e-1269.7
NC_010611:240839:253002253002253349348Acinetobacter baumannii ACICU, complete genomeMembrane transporter of cations and cationic drugs6e-1269.7
NC_009140:121107:133620133620133967348Salmonella enterica enterica sv Newport str. SL254, completequaternary ammonium compound-resistance protein QacEdelta16e-1269.7
NC_014836:2919508:101621016210509348Desulfurispirillum indicum S5 chromosome, complete genomesmall multidrug resistance protein6e-1269.7
NC_006856:26438:264382643826785348Salmonella enterica subsp. enterica serovar Choleraesuis strORF3-QacEdelta1 fusion protein6e-1269.7
NC_009349:78000:909939099391340348Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completequaternary ammonium compound-resistance protein QacEdelta16e-1269.7
NC_011083:1524337:153030815303081530769462Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,multidrug efflux protein5e-1269.7
NC_017387:247462:278613278613278960348Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomequaternary ammonium compound-resistance protein6e-1269.7
NC_017387:247462:267779267779268126348Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomequaternary ammonium compound-resistance protein6e-1269.7
NC_017171:1331794:134567813456781346025348Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeOrf3/QacEdelta1 fusion protein6e-1269.7
NC_016860:4055117:407591640759164076263348Salmonella enterica subsp. enterica serovar Typhimurium strmultidrug efflux system protein6e-1269.7
NC_009838:81913:104136104136104483348Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencequaternary ammonium compound resistance protein6e-1269.7
NC_010410:3606826:367586536758653676212348Acinetobacter baumannii AYE, complete genomeethidium bromide resistance protein (E1 protein)6e-1269.7
NC_013209:2248119:229511522951152295453339Acetobacter pasteurianus IFO 3283-01, complete genomequaternary ammonium compound-resistance protein EmrE8e-1269.3
NC_018524:2423016:242748424274842427807324Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomesmall Multidrug Resistance family protein1e-1168.6
NC_012947:3231893:324514232451423245474333Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completemultidrug efflux protein2e-1167.4
NC_012967:531000:540205540205540537333Escherichia coli B str. REL606 chromosome, complete genomemultidrug efflux protein2e-1167.4
NC_007514:1475323:148182314818231482149327Chlorobium chlorochromatii CaD3, complete genomeSMR drug efflux transporter1e-1065.1
NC_011294:1465500:148213214821321482470339Salmonella enterica subsp. enterica serovar Enteritidis strmulti-drug transporter2e-1064.7
NC_005061:594500:611253611253611582330Candidatus Blochmannia floridanus, complete genomeemrE protein (methyl viologen resistance protein C) (ethidium resistance protein)2e-1064.3
NC_015761:1630000:163487516348751635213339Salmonella bongori NCTC 12419, complete genomemultidrug transporter2e-1064.3
NC_011149:1429523:146019614601961460534339Salmonella enterica subsp. enterica serovar Agona str. SL483,multidrug transporter EmrE3e-1063.5
NC_008319:615135:616654616654616983330Synechococcus sp. CC9311, complete genomepossible drug resistance protein8e-1062.4
NC_013956:3273340:329058332905833290834252Pantoea ananatis LMG 20103 chromosome, complete genomeEmrE5e-0960.1
NC_020063:3690308:371635037163503716679330Enterobacteriaceae bacterium strain FGI 57, complete genomecation/cationic drug transporter4e-0960.1
NC_013768:1802313:181707318170731817396324Listeria monocytogenes 08-5923, complete genomesmall multidrug resistance protein, SMR family7e-0959.3
NC_013766:1835964:185034218503421850665324Listeria monocytogenes 08-5578 chromosome, complete genomesmall multidrug resistance protein, SMR family7e-0959.3
NC_014910:2585747:260679326067932607125333Alicycliphilus denitrificans BC chromosome, complete genomesmall multidrug resistance protein8e-0959.3
NC_019842:3921424:393298739329873933364378Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Spermidine export protein mdtJ1e-0858.9
NC_011772:323050:336165336165336488324Bacillus cereus G9842, complete genomemultidrug resistance protein, Smr family8e-0958.9
NC_011725:334000:349955349955350278324Bacillus cereus B4264 chromosome, complete genomemultidrug resistance protein, Smr family8e-0958.9
NC_014171:343834:358649358649358972324Bacillus thuringiensis BMB171 chromosome, complete genomequaternary ammonium8e-0958.9
NC_021150:68251:753587535875630273Azotobacter vinelandii CA6, complete genomemultidrug efflux SMR transporter1e-0858.5
NC_012560:68251:753587535875630273Azotobacter vinelandii DJ, complete genomemultidrug efflux SMR transporter1e-0858.5
NC_019962:1909103:192404719240471924379333Natrinema pellirubrum DSM 15624, complete genomecation/cationic drug transporter2e-0858.2
NC_014562:1698253:170186017018601702210351Pantoea vagans C9-1 chromosome, complete genomePutative SMR family transporter ydgF2e-0858.2
NC_008751:1431905:144266114426611442990330Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomesmall multidrug resistance protein2e-0857.8
NC_002937:2068117:207718420771842077513330Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completequaternary ammonium compound-resistance protein QacC, putative2e-0857.8
NC_014909:619407:624218624218624547330Candidatus Blochmannia vafer str. BVAF chromosome, complete genomequaternary ammonium compound-resistance protein qacE2e-0857.8
NC_020063:3690308:371600337160033716353351Enterobacteriaceae bacterium strain FGI 57, complete genomecation/cationic drug transporter3e-0857.4
NC_015572:1974000:199254119925411992861321Methylomonas methanica MC09 chromosome, complete genomesmall multidrug resistance protein3e-0857.4
NC_009436:2056000:207391720739172074279363Enterobacter sp. 638, complete genomemultidrug efflux system protein MdtJ8e-0752.4
NC_016745:2028424:206390120639012064230330Oceanimonas sp. GK1 chromosome, complete genomemultidrug efflux system protein MdtI9e-0752.4
NC_014562:1698253:170219717021971702526330Pantoea vagans C9-1 chromosome, complete genomePutative SMR family transporter ydgE1e-0652.4
NC_008027:5533311:553819155381915538550360Pseudomonas entomophila L48, complete genomemultidrug transport protein (SMR superfamily)1e-0652.4
NC_006513:1379735:140514514051451405513369Azoarcus sp. EbN1, complete genomehypothetical protein, putative efflux system2e-0651.2
NC_009253:3272000:327410332741033274423321Desulfotomaculum reducens MI-1 chromosome, complete genomesmall multidrug resistance protein3e-0650.8
NC_013744:300000:325888325888326223336Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completesmall multidrug resistance protein3e-0650.8
NC_010511:7024412:705008570500857050405321Methylobacterium sp. 4-46 chromosome, complete genomesmall multidrug resistance protein3e-0650.4
NC_003902:555699:575410575410575724315Xanthomonas campestris pv. campestris str. ATCC 33913, completeSugE protein4e-0650.1
NC_007086:557789:577500577500577814315Xanthomonas campestris pv. campestris str. 8004, complete genomeSugE protein4e-0650.1
NC_009436:2056000:207426620742662074595330Enterobacter sp. 638, complete genomemultidrug efflux system protein MdtI6e-0649.7
NC_011958:735755:757588757588757875288Rhodobacter sphaeroides KD131 chromosome 2, complete genomeSmall multidrug resistance protein5e-0649.7
NC_014507:374359:378904378904379236333Methanoplanus petrolearius DSM 11571 chromosome, complete genomesmall multidrug resistance protein8e-0649.3
NC_014306:1981956:199016319901631990516354Erwinia billingiae Eb661, complete genomeMultidrug resistance protein MdtJ8e-0649.3
NC_017100:1407804:141803014180301418359330Acetobacter pasteurianus IFO 3283-03, complete genomequaternary ammonium compound-resistance protein EmrE9e-0648.9
NC_017108:1406787:141701314170131417342330Acetobacter pasteurianus IFO 3283-12, complete genomequaternary ammonium compound-resistance protein EmrE9e-0648.9
NC_017111:1406787:141701314170131417342330Acetobacter pasteurianus IFO 3283-32, complete genomequaternary ammonium compound-resistance protein EmrE9e-0648.9
NC_017121:1406787:141701314170131417342330Acetobacter pasteurianus IFO 3283-07, complete genomequaternary ammonium compound-resistance protein EmrE9e-0648.9
NC_017125:1407804:141803014180301418359330Acetobacter pasteurianus IFO 3283-22, complete genomequaternary ammonium compound-resistance protein EmrE9e-0648.9
NC_017146:1407804:141803014180301418359330Acetobacter pasteurianus IFO 3283-26, complete genomequaternary ammonium compound-resistance protein EmrE9e-0648.9
NC_017150:1406793:141701914170191417348330Acetobacter pasteurianus IFO 3283-01-42C, complete genomequaternary ammonium compound-resistance protein EmrE9e-0648.9
NC_013209:1406793:141701914170191417348330Acetobacter pasteurianus IFO 3283-01, complete genomequaternary ammonium compound-resistance protein EmrE9e-0648.9