Pre_GI: BLASTN Hits

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Query: NC_012792:385670 Variovorax paradoxus S110 chromosome 2, complete genome

Start: 385670, End: 409914, Length: 24245

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012791:40790624079062410253023469Variovorax paradoxus S110 chromosome 1, complete genome01120BLASTN svgBLASTP svg
NC_015138:1582458*1582458160012917672Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete01061BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome01003BLASTN svgBLASTP svg
NC_015410:22588002258800228509926300Pseudomonas mendocina NK-01 chromosome, complete genome0789BLASTN svgBLASTP svg
NC_015422:28068322806832284558938758Alicycliphilus denitrificans K601 chromosome, complete genome0765BLASTN svgBLASTP svg
NC_008782:28578992857899289359935701Acidovorax sp. JS42, complete genome0646BLASTN svgBLASTP svg
NC_003296:26211826211828615024033Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete4e-150539BLASTN svgBLASTP svg
NC_010172:480000*48000053036650367Methylobacterium extorquens PA1, complete genome4e-79303BLASTN svgBLASTP svg
NC_012808:19790001979000199740518406Methylobacterium extorquens AM1, complete genome4e-79303BLASTN svgBLASTP svg
NC_009138:15448351544835157592231088Herminiimonas arsenicoxydans, complete genome4e-70274BLASTN svgBLASTP svg
NC_009142:25655612565561258937023810Saccharopolyspora erythraea NRRL 2338, complete genome2e-62248BLASTN svgBLASTP svg
NC_010508:27762832776283280459928317Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence2e-59238BLASTN svgBLASTP svg
NC_014532:2108897*2108897214516836272Halomonas elongata DSM 2581, complete genome5e-57230BLASTN svgBLASTP svg
NC_015957:32821833282183330581123629Streptomyces violaceusniger Tu 4113 chromosome, complete genome8e-53216BLASTN svgBLASTP svg
NC_008269:86800086800091059942600Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence2e-44188BLASTN svgBLASTP svg
NC_007963:32253063225306325338328078Chromohalobacter salexigens DSM 3043, complete genome7e-44186BLASTN svgBLASTP svg
NC_010617:19103881910388192887618489Kocuria rhizophila DC2201, complete genome4e-36161BLASTN svgBLASTP svg
NC_014931:1642179*1642179167070028522Variovorax paradoxus EPS chromosome, complete genome6e-35157BLASTN svgBLASTP svg
NC_010002:4175809*4175809419921123403Delftia acidovorans SPH-1, complete genome3e-34155BLASTN svgBLASTP svg
NC_014915:33207683320768336792347156Geobacillus sp. Y412MC52 chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_013235:1938889*1938889196008021192Nakamurella multipartita DSM 44233, complete genome2e-31145BLASTN svgBLASTP svg
NC_013411:33147993314799335852243724Geobacillus sp. Y412MC61, complete genome1e-30143BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome2e-25125BLASTN svgBLASTP svg
NC_014931:62038726203872625051746646Variovorax paradoxus EPS chromosome, complete genome6e-23117BLASTN svgBLASTP svg
NC_015138:69386569386571749823634Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete5e-20107BLASTN svgBLASTP svg
NC_008752:2334511*2334511236012625616Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-20107BLASTN svgBLASTP svg
NC_008752:26190326190328210620204Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008752:38284383828438385232823891Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008752:41477154147715417135323639Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015138:38097323809732383322923498Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1695.6BLASTN svgBLASTP svg
NC_010002:48901924890192491000619815Delftia acidovorans SPH-1, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008027:2621443*2621443264643624994Pseudomonas entomophila L48, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015138:41758314175831419502219192Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-1591.7BLASTN svgBLASTP svg
NC_006087:23261432326143235421928077Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008027:55850755850758141922913Pseudomonas entomophila L48, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015563:33090973309097334276333667Delftia sp. Cs1-4 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015563:26566282656628268487728250Delftia sp. Cs1-4 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008463:282565*28256532073638172Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012721:16864501686450170480118352Burkholderia glumae BGR1 chromosome 2, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010170:1661915*1661915168523723323Bordetella petrii, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008027:4280000*4280000430482424825Pseudomonas entomophila L48, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015138:32238632238634172219337Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete5e-1177.8BLASTN svgBLASTP svg
NC_015563:33494233494235315818217Delftia sp. Cs1-4 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_005773:57347335734733576109926367Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007492:31804803180480323474054261Pseudomonas fluorescens PfO-1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010002:42566514256651428631629666Delftia acidovorans SPH-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009832:33130583313058333643323376Serratia proteamaculans 568, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014098:1553900*1553900157609922200Bacillus tusciae DSM 2912 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014931:60316456031645605636324719Variovorax paradoxus EPS chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020064:29218092921809295042328615Serratia marcescens FGI94, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007005:58822055882205592100338799Pseudomonas syringae pv. syringae B728a, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005773:16757931675793169861222820Pseudomonas syringae pv. phaseolicola 1448A, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_008752:4086283*4086283411381327531Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005085:14980001498000152157823579Chromobacterium violaceum ATCC 12472, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007511:17805001780500180270922210Burkholderia sp. 383 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_015683:22799042279904231865238749Corynebacterium ulcerans BR-AD22 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014931:49855004985500500477719278Variovorax paradoxus EPS chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010551:41548741548744051025024Burkholderia ambifaria MC40-6 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_009079:40289140289142220419314Burkholderia mallei NCTC 10247 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_008835:18279051827905185016122257Burkholderia mallei NCTC 10229 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_008786:15071391507139153709929961Verminephrobacter eiseniae EF01-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006349:40080740080742001219206Burkholderia mallei ATCC 23344 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_003198:33131433131435709925786Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0661.9BLASTN svgBLASTP svg