Pre_GI: BLASTP Hits

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Query: NC_012791:4794362:4813756 Variovorax paradoxus S110 chromosome 1, complete genome

Start: 4813756, End: 4814277, Length: 522

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012791:2386000:239303923930392393611573Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family1e-90332
NC_012792:627500:634865634865635437573Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, XRE family8e-84308
NC_014010:1850500:188064418806441881270627Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA-binding protein2e-32138
NC_012808:2886282:289424728942472894843597Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, XRE family8e-32136
NC_011757:517000:548476548476549072597Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, XRE family2e-30132
NC_008148:2498000:252032625203262520988663Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, XRE family with cupin sensor2e-23107
NC_016025:552000:561697561697562284588Candidatus Chloracidobacterium thermophilum B chromosome chromosomeputative transcriptional regulator6e-1890.1
NC_006510:2910000:291967829196782920220543Geobacillus kaustophilus HTA426, complete genomehypothetical protein1e-1582.8
NC_012032:2925000:293613129361312936766636Chloroflexus sp. Y-400-fl, complete genometranscriptional regulator, XRE family2e-1478.2
NC_010175:2925084:294094629409462941581636Chloroflexus aurantiacus J-10-fl, complete genomeCupin 2 conserved barrel domain protein2e-1478.2
NC_014640:5047201:504847650484765049030555Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein2e-1271.6
NC_014831:1843835:186641118664111867175765Thermaerobacter marianensis DSM 12885 chromosome, complete genomeCupin 2 conserved barrel domain protein9e-1269.7
NC_014960:1697818:171901417190141719634621Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-1168.9
NC_013665:918313:937836937836938390555Methanocella paludicola SANAE, complete genomeputative HTH-type transcriptional regulator2e-1168.6
NC_009614:821247:823492823492824046555Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator3e-1168.2
UCMB5137:1:101211012110666546Bacillus atrophaeus UCMB-5137unknown2e-1168.2
NC_012108:946314:962372962372962944573Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (Cro/CI family protein)1e-1066.2
NC_007907:4859735:487593148759314876476546Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1063.9
NC_011898:1762000:178029717802971780845549Clostridium cellulolyticum H10, complete genometranscriptional regulator, XRE family7e-1063.5
NC_015727:764744:769843769843770589747Cupriavidus necator N-1 plasmid BB1p, complete sequenceCro/CI family transcriptional regulator protein9e-1062.8
NC_009515:307800:310577310577311137561Methanobrevibacter smithii ATCC 35061, complete genomexenobiotic response element family DNA binding protein2e-0962
NC_020126:7285452:729938772993877299959573Myxococcus stipitatus DSM 14675, complete genomeXRE family transcriptional regulator3e-0961.2
NC_020063:4653422:466162746616274662175549Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator6e-0960.1
NC_009654:2940278:294247229424722943083612Marinomonas sp. MWYL1, complete genomeXRE family transcriptional regulator1e-0859.3
NC_007907:4859735:487526948752694875916648Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0859.3
NC_006350:1084930:108965110896511090214564Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DNA-binding protein4e-0857.8
NC_015577:3688071:370597937059793706536558Treponema azotonutricium ZAS-9 chromosome, complete genomeXRE family transcriptional regulator with cupin sensor5e-0857
NC_009659:997779:100550010055001006123624Janthinobacterium sp. Marseille chromosome, complete genomeCro/CI family transcriptional regulator1e-0756.2
NC_014118:2417838:242979424297942430366573Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, XRE family9e-0856.2
NC_015500:900807:900807900807901394588Treponema brennaborense DSM 12168 chromosome, complete genomehelix-turn-helix domain protein1e-0755.8
NC_014328:1286407:130205613020561302601546Clostridium ljungdahlii ATCC 49587 chromosome, complete genometranscriptional regulator1e-0755.8
NC_007650:2901751:295029503558609Burkholderia thailandensis E264 chromosome II, complete sequenceDNA-binding protein1e-0755.8
NC_016818:3887000:391853439185343919082549Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator2e-0755.1
NC_009075:3113393:294829483556609Burkholderia pseudomallei 668 chromosome II, complete sequenceDNA-binding protein3e-0754.7
NC_009078:3087759:294829483556609Burkholderia pseudomallei 1106a chromosome II, complete sequenceDNA-binding/cupin domain protein3e-0754.7
NC_007435:1825741:184202518420251842633609Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative DNA-binding protein3e-0754.7
NC_006349:2311817:408640864694609Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceDNA-binding protein4e-0754.3
NC_008784:1151305:116827711682771168885609Burkholderia mallei SAVP1 chromosome I, complete sequenceDNA-binding protein4e-0754.3
NC_008835:1483237:149940114994011500009609Burkholderia mallei NCTC 10229 chromosome I, complete sequenceDNA-binding protein4e-0754.3
NC_006351:3159630:294629463554609Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding protein4e-0754.3
NC_009079:2339756:408640864694609Burkholderia mallei NCTC 10247 chromosome I, complete sequenceDNA-binding protein4e-0754.3
NC_013939:1535071:155165715516571552193537Deferribacter desulfuricans SSM1, complete genomeXRE family transcriptional regulator6e-0753.5
NC_014654:2311818:232518923251892325725537Halanaerobium sp. 'sapolanicus' chromosome, complete genomeCupin 2 conserved barrel domain protein1e-0652.8
NC_010067:3538169:353816935381693538783615Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0652.8
NC_020064:2728569:273358927335892734137549Serratia marcescens FGI94, complete genomeputative transcriptional regulator1e-0652.8
NC_015723:2116090:211951321195132120103591Cupriavidus necator N-1 chromosome 2, complete sequenceN-carbamoyl-L-amino acid hydrolase AmaB2e-0652.4
NC_013947:4363250:437654343765434377166624Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, XRE family3e-0651.6
NC_014532:1481787:150309715030971503672576Halomonas elongata DSM 2581, complete genomehypothetical protein2e-0651.6
NC_015573:1979202:199861019986101999377768Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0651.6
NC_008314:1275617:128201212820121282749738Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator2e-0651.6
NC_015276:2769000:277194627719462772557612Marinomonas mediterranea MMB-1 chromosome, complete genomehelix-turn-helix domain protein3e-0651.2
NC_017223:3345902:334953933495393350378840Bordetella pertussis CS chromosome, complete genomeMerR family transcriptional regulator6e-0650.4
NC_002929:3305682:330931933093193310158840Bordetella pertussis Tohama I, complete genomeprobable MerR-family transcriptional regulator6e-0650.4
NC_010511:4313769:431666343166634317268606Methylobacterium sp. 4-46 chromosome, complete genomeXRE family transcriptional regulator7e-0650.1