Pre_GI: BLASTN Hits

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Query: NC_012759:3648500 Escherichia coli BW2952 chromosome, complete genome

Start: 3648500, End: 3668037, Length: 19538

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010468:111504*11150413814926646Escherichia coli ATCC 8739, complete genome028010BLASTN svgBLASTP svg
NC_009800:3787320*3787320380985222533Escherichia coli HS, complete genome022130BLASTN svgBLASTP svg
CP002516:119935*11993514694827014Escherichia coli KO11, complete genome020050BLASTN svgBLASTP svg
CP002185:39645003964500398613821639Escherichia coli W, complete genome020050BLASTN svgBLASTP svg
NC_011748:41319244131924415503823115Escherichia coli 55989, complete genome019000BLASTN svgBLASTP svg
CU928145:41319244131924415503823115Escherichia coli 55989 chromosome, complete genome019000BLASTN svgBLASTP svg
AP010958:4707712*4707712472598018269Escherichia coli O103:H2 str. 12009 DNA, complete genome014970BLASTN svgBLASTP svg
NC_009801:40739684073968409617422207Escherichia coli E24377A, complete genome014930BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome08437BLASTN svgBLASTP svg
NC_007606:37551553755155377834323189Shigella dysenteriae Sd197, complete genome08173BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome07138BLASTN svgBLASTP svg
NC_010498:3988351*3988351401846830118Escherichia coli SMS-3-5, complete genome07123BLASTN svgBLASTP svg
CP002185:79473279473281843123700Escherichia coli W, complete genome06752BLASTN svgBLASTP svg
NC_010468:32093263209326323524825923Escherichia coli ATCC 8739, complete genome06681BLASTN svgBLASTP svg
NC_013282:116649*11664913955822910Cronobacter turicensis, complete genome01487BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome01174BLASTN svgBLASTP svg
NC_010468:2406387*2406387242509318707Escherichia coli ATCC 8739, complete genome0662BLASTN svgBLASTP svg
NC_020260:38365003836500386459928100Cronobacter sakazakii Sp291, complete genome2e-130474BLASTN svgBLASTP svg
CU928160:25693225693227863921708Escherichia coli IAI1 chromosome, complete genome1e-128468BLASTN svgBLASTP svg
NC_002655:26123626123628140820173Escherichia coli O157:H7 EDL933, complete genome6e-124452BLASTN svgBLASTP svg
NC_002695:26123526123528377222538Escherichia coli O157:H7 str. Sakai, complete genome6e-124452BLASTN svgBLASTP svg
NC_009778:38320003832000386183229833Enterobacter sakazakii ATCC BAA-894, complete genome2e-123450BLASTN svgBLASTP svg
NC_010473:16076461607646163120923564Escherichia coli str. K-12 substr. DH10B, complete genome2e-96361BLASTN svgBLASTP svg
NC_000913:15170511517051154061423564Escherichia coli K12, complete genome2e-96361BLASTN svgBLASTP svg
AC_000091:15219761521976154430422329Escherichia coli W3110 DNA, complete genome2e-96361BLASTN svgBLASTP svg
NC_007384:17633751763375178359920225Shigella sonnei Ss046, complete genome7e-96359BLASTN svgBLASTP svg
NC_013716:4824541*4824541484830623766Citrobacter rodentium ICC168, complete genome7e-62246BLASTN svgBLASTP svg
NC_007384:27881027881029760818799Shigella sonnei Ss046, complete genome3e-61244BLASTN svgBLASTP svg
NC_013716:27645502764550279838233833Citrobacter rodentium ICC168, complete genome2e-59238BLASTN svgBLASTP svg
NC_015224:4473230*4473230449714523916Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-54222BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome2e-43184BLASTN svgBLASTP svg
NC_004547:13850013850015906820569Erwinia carotovora subsp. atroseptica SCRI1043, complete genome8e-37163BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-29139BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome1e-20109BLASTN svgBLASTP svg
NC_012917:46464914646491466766521175Pectobacterium carotovorum subsp. carotovorum PC1, complete genome7e-19103BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome3e-18101BLASTN svgBLASTP svg
AP010958:36695003669500372827458775Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_004603:37032037032039589225573Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete4e-1797.6BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_007384:38970003897000391653419535Shigella sonnei Ss046, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_012660:4734363*4734363475525820896Pseudomonas fluorescens SBW25 chromosome, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_013416:1748848*1748848176691818071Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_007492:85742885742888733529908Pseudomonas fluorescens PfO-1, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_007384:10860251086025111635930335Shigella sonnei Ss046, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021150:43504614350461437377523315Azotobacter vinelandii CA6, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012560:43504654350465437377923315Azotobacter vinelandii DJ, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009832:110239*11023913543725199Serratia proteamaculans 568, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002695:20565452056545207693920395Escherichia coli O157:H7 str. Sakai, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004431:35131473513147354268029534Escherichia coli CFT073, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_007946:3855445*3855445387497119527Escherichia coli UTI89, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008563:3888232*3888232390776619535Escherichia coli APEC O1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004337:17836451783645180635922715Shigella flexneri 2a str. 301, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007384:17378851737885176063922755Shigella sonnei Ss046, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007384:45300004530000455031620317Shigella sonnei Ss046, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007613:41568414156841418149124651Shigella boydii Sb227, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_007963:3553678*3553678357230918632Chromohalobacter salexigens DSM 3043, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009801:46430004643000466340420405Escherichia coli E24377A, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010658:42573104257310427618618877Shigella boydii CDC 3083-94, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_000913:43074714307471432826120791Escherichia coli K12, complete genome6e-0763.9BLASTN svgBLASTP svg
CU928160:43951564395156441536720212Escherichia coli IAI1 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
CP002516:44312354431235445210920875Escherichia coli KO11, complete genome6e-0763.9BLASTN svgBLASTP svg
CP002185:45661504566150459009923950Escherichia coli W, complete genome6e-0763.9BLASTN svgBLASTP svg
AP010958:50221965022196504082118626Escherichia coli O103:H2 str. 12009 DNA, complete genome6e-0763.9BLASTN svgBLASTP svg
AC_000091:43131674313167433668223516Escherichia coli W3110 DNA, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_002655:51948045194804521379718994Escherichia coli O157:H7 EDL933, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_002695:51648195164819518468719869Escherichia coli O157:H7 str. Sakai, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004431:48676484867648489054022893Escherichia coli CFT073, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013172:783097*78309780703523939Brachybacterium faecium DSM 4810, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010473:44094924409492443038920898Escherichia coli str. K-12 substr. DH10B, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010468:43051054305105432709121987Escherichia coli ATCC 8739, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009800:43322294332229435609923871Escherichia coli HS, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008563:46560004656000467809922100Escherichia coli APEC O1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008253:45419154541915456410622192Escherichia coli 536, complete genome6e-0763.9BLASTN svgBLASTP svg
AP010958:143358*14335816609922742Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-0661.9BLASTN svgBLASTP svg
CP002185:146389*14638916862022232Escherichia coli W, complete genome2e-0661.9BLASTN svgBLASTP svg
CU928145:143755*14375516736523611Escherichia coli 55989 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006905:22356072235607226436328757Salmonella enterica subsp. enterica serovar Choleraesuis str2e-0661.9BLASTN svgBLASTP svg
NC_007613:29818292981829300438522557Shigella boydii Sb227, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011748:143755*14375516736523611Escherichia coli 55989, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011750:47194774719477473972720251Escherichia coli IAI39 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_020063:3690308*3690308375363663329Enterobacteriaceae bacterium strain FGI 57, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_020063:46534224653422467509921678Enterobacteriaceae bacterium strain FGI 57, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008253:25705925705928215125093Escherichia coli 536, complete genome9e-0660BLASTN svgBLASTP svg
NC_007946:25874725874728282624080Escherichia coli UTI89, complete genome9e-0660BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome9e-0660BLASTN svgBLASTP svg
NC_004741:3240909*3240909326236621458Shigella flexneri 2a str. 2457T, complete genome9e-0660BLASTN svgBLASTP svg
NC_004337:32497913249791327283723047Shigella flexneri 2a str. 301, complete genome9e-0660BLASTN svgBLASTP svg
NC_002695:91750991750994039822890Escherichia coli O157:H7 str. Sakai, complete genome9e-0660BLASTN svgBLASTP svg
NC_000913:3256307*3256307327821621910Escherichia coli K12, complete genome9e-0660BLASTN svgBLASTP svg
CU928160:3344746*3344746336309918354Escherichia coli IAI1 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
CP002516:613462*61346263169018229Escherichia coli KO11, complete genome9e-0660BLASTN svgBLASTP svg
CP002185:3475991*3475991350005224062Escherichia coli W, complete genome9e-0660BLASTN svgBLASTP svg
NC_008258:32247213224721324719422474Shigella flexneri 5 str. 8401, complete genome9e-0660BLASTN svgBLASTP svg
NC_008563:258725*25872528280524081Escherichia coli APEC O1, complete genome9e-0660BLASTN svgBLASTP svg
NC_015563:33494233494235315818217Delftia sp. Cs1-4 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_011751:39842363984236400841624181Escherichia coli UMN026 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_011751:25683025683028052023691Escherichia coli UMN026 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_010658:3014371*3014371303259918229Shigella boydii CDC 3083-94, complete genome9e-0660BLASTN svgBLASTP svg
NC_010473:3354052*3354052337759923548Escherichia coli str. K-12 substr. DH10B, complete genome9e-0660BLASTN svgBLASTP svg
NC_010468:61381261381263388120070Escherichia coli ATCC 8739, complete genome9e-0660BLASTN svgBLASTP svg
NC_010468:3970995*3970995399406323069Escherichia coli ATCC 8739, complete genome9e-0660BLASTN svgBLASTP svg
NC_009801:35950013595001361359918599Escherichia coli E24377A, complete genome9e-0660BLASTN svgBLASTP svg
NC_009801:11921*119213399422074Escherichia coli E24377A, complete genome9e-0660BLASTN svgBLASTP svg
NC_009800:3307123*3307123332547318351Escherichia coli HS, complete genome9e-0660BLASTN svgBLASTP svg
AC_000091:3258377*3258377328148023104Escherichia coli W3110 DNA, complete genome9e-0660BLASTN svgBLASTP svg