Pre_GI: BLASTN Hits

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Query: NC_012759:2862807 Escherichia coli BW2952 chromosome, complete genome

Start: 2862807, End: 2895145, Length: 32339

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
AC_000091:29762932976293300863132339Escherichia coli W3110 DNA, complete genome028840BLASTN svgBLASTP svg
NC_010473:3069529*3069529310059831070Escherichia coli str. K-12 substr. DH10B, complete genome026480BLASTN svgBLASTP svg
NC_000913:2975659*2975659300672831070Escherichia coli K12, complete genome026480BLASTN svgBLASTP svg
CP002516:903241*90324194330840068Escherichia coli KO11, complete genome025370BLASTN svgBLASTP svg
CP002185:3167738*3167738320702439287Escherichia coli W, complete genome025360BLASTN svgBLASTP svg
NC_010468:906957*90695794803541079Escherichia coli ATCC 8739, complete genome024590BLASTN svgBLASTP svg
NC_009800:29959582995958302338427427Escherichia coli HS, complete genome024490BLASTN svgBLASTP svg
CU928160:3030324*3030324306823137908Escherichia coli IAI1 chromosome, complete genome022760BLASTN svgBLASTP svg
CU928145:3196173*3196173323284736675Escherichia coli 55989 chromosome, complete genome022750BLASTN svgBLASTP svg
NC_011748:3196173*3196173323284736675Escherichia coli 55989, complete genome022750BLASTN svgBLASTP svg
AP010958:3474077*3474077351339539319Escherichia coli O103:H2 str. 12009 DNA, complete genome022640BLASTN svgBLASTP svg
NC_009801:31757143175714321109935386Escherichia coli E24377A, complete genome022510BLASTN svgBLASTP svg
NC_011750:3407500*3407500343726129762Escherichia coli IAI39 chromosome, complete genome020460BLASTN svgBLASTP svg
NC_011751:3285646*3285646333126645621Escherichia coli UMN026 chromosome, complete genome020340BLASTN svgBLASTP svg
NC_002695:3702344*3702344374703744694Escherichia coli O157:H7 str. Sakai, complete genome019400BLASTN svgBLASTP svg
NC_002655:3769643*3769643381434344701Escherichia coli O157:H7 EDL933, complete genome019390BLASTN svgBLASTP svg
NC_007384:3151344*3151344317840127058Shigella sonnei Ss046, complete genome018720BLASTN svgBLASTP svg
AC_000091:31802753180275319962119347Escherichia coli W3110 DNA, complete genome02640BLASTN svgBLASTP svg
NC_000913:3176000*3176000319898722988Escherichia coli K12, complete genome02640BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome02640BLASTN svgBLASTP svg
NC_010473:3273882*3273882329673222851Escherichia coli str. K-12 substr. DH10B, complete genome02640BLASTN svgBLASTP svg
NC_010473:4596500*4596500461806621567Escherichia coli str. K-12 substr. DH10B, complete genome02639BLASTN svgBLASTP svg
NC_000913:44947734494773451470019928Escherichia coli K12, complete genome02639BLASTN svgBLASTP svg
AC_000091:4501430*4501430452291521486Escherichia coli W3110 DNA, complete genome02639BLASTN svgBLASTP svg
NC_009788:16360163603711520756Escherichia coli E24377A plasmid pETEC_73, complete sequence02623BLASTN svgBLASTP svg
NC_007384:20074672007467203964532179Shigella sonnei Ss046, complete genome02613BLASTN svgBLASTP svg
NC_007384:17378851737885176063922755Shigella sonnei Ss046, complete genome02609BLASTN svgBLASTP svg
NC_007384:37417083741708376309921392Shigella sonnei Ss046, complete genome02601BLASTN svgBLASTP svg
NC_008258:25428632542863256544822586Shigella flexneri 5 str. 8401, complete genome02597BLASTN svgBLASTP svg
NC_007384:10860251086025111635930335Shigella sonnei Ss046, complete genome02593BLASTN svgBLASTP svg
NC_010658:1933605*1933605196015326549Shigella boydii CDC 3083-94, complete genome02587BLASTN svgBLASTP svg
NC_004741:41605004160500418981229313Shigella flexneri 2a str. 2457T, complete genome02585BLASTN svgBLASTP svg
NC_007613:41197714119771413859918829Shigella boydii Sb227, complete genome02583BLASTN svgBLASTP svg
NC_002695:15713891571389159815826770Escherichia coli O157:H7 str. Sakai, complete genome02583BLASTN svgBLASTP svg
NC_002655:16559441655944168171125768Escherichia coli O157:H7 EDL933, complete genome02583BLASTN svgBLASTP svg
NC_010658:1193225*1193225121671123487Shigella boydii CDC 3083-94, complete genome02575BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome02575BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome02571BLASTN svgBLASTP svg
NC_010658:1772994*1772994179509922106Shigella boydii CDC 3083-94, complete genome02567BLASTN svgBLASTP svg
NC_007606:12091321209132122967220541Shigella dysenteriae Sd197, complete genome02561BLASTN svgBLASTP svg
NC_008258:32247213224721324719422474Shigella flexneri 5 str. 8401, complete genome02559BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome02559BLASTN svgBLASTP svg
NC_010658:15931371593137161115518019Shigella boydii CDC 3083-94, complete genome02553BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome02553BLASTN svgBLASTP svg
NC_008258:35505003550500357858028081Shigella flexneri 5 str. 8401, complete genome02545BLASTN svgBLASTP svg
NC_010660:33109331095109917991Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence02531BLASTN svgBLASTP svg
NC_004337:2747917*2747917277096123045Shigella flexneri 2a str. 301, complete genome02484BLASTN svgBLASTP svg
AC_000091:1083798*1083798110686123064Escherichia coli W3110 DNA, complete genome02460BLASTN svgBLASTP svg
NC_007613:1353500*1353500137891925420Shigella boydii Sb227, complete genome02456BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome02385BLASTN svgBLASTP svg
NC_004741:20097692009769203209922331Shigella flexneri 2a str. 2457T, complete genome02323BLASTN svgBLASTP svg
NC_011751:34536833453683351238358701Escherichia coli UMN026 chromosome, complete genome02298BLASTN svgBLASTP svg
NC_004431:3409389*3409389349493685548Escherichia coli CFT073, complete genome02298BLASTN svgBLASTP svg
NC_007384:1320287*1320287134781127525Shigella sonnei Ss046, complete genome02222BLASTN svgBLASTP svg
NC_010498:16593281659328168149222165Escherichia coli SMS-3-5, complete genome02196BLASTN svgBLASTP svg
NC_010498:12101451210145123409923955Escherichia coli SMS-3-5, complete genome02194BLASTN svgBLASTP svg
NC_010498:10940001094000111633222333Escherichia coli SMS-3-5, complete genome02194BLASTN svgBLASTP svg
NC_004851:15767515767518009922425Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence02131BLASTN svgBLASTP svg
NC_010658:36226103622610364133018721Shigella boydii CDC 3083-94, complete genome02058BLASTN svgBLASTP svg
NC_010498:32913443291344332017728834Escherichia coli SMS-3-5, complete genome01626BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome01596BLASTN svgBLASTP svg
NC_009790:42112421126914727036Escherichia coli E24377A plasmid pETEC_74, complete sequence01483BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome01400BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome01400BLASTN svgBLASTP svg
NC_011750:18495611849561187012520565Escherichia coli IAI39 chromosome, complete genome01302BLASTN svgBLASTP svg
NC_007384:16968311696831171856121731Shigella sonnei Ss046, complete genome01273BLASTN svgBLASTP svg
NC_007941:11319113195659945281Escherichia coli UTI89 plasmid pUTI89, complete sequence0918BLASTN svgBLASTP svg
NC_004337:20359452035945205669020746Shigella flexneri 2a str. 301, complete genome0874BLASTN svgBLASTP svg
AP010958:3853082*3853082389809945018Escherichia coli O103:H2 str. 12009 DNA, complete genome0743BLASTN svgBLASTP svg
CP002797:4603787*4603787464340739621Escherichia coli NA114, complete genome3e-167597BLASTN svgBLASTP svg
NC_004431:43191524319152434223723086Escherichia coli CFT073, complete genome6e-159569BLASTN svgBLASTP svg
NC_008563:47078264707826473072322898Escherichia coli APEC O1, complete genome4e-154553BLASTN svgBLASTP svg
NC_004851:19170919170922249930791Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence1e-150541BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome1e-138502BLASTN svgBLASTP svg
NC_007946:48759974875997491969643700Escherichia coli UTI89, complete genome1e-138502BLASTN svgBLASTP svg
NC_015663:2807574*2807574283616128588Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-112414BLASTN svgBLASTP svg
CU928159:30700*307004909918400Escherichia coli str. 55989 plasmid 55989p, complete genome3e-108400BLASTN svgBLASTP svg
NC_011083:3171171*3171171319192520755Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,5e-107396BLASTN svgBLASTP svg
NC_004631:3030580*3030580304986119282Salmonella enterica subsp. enterica serovar Typhi Ty2, complete5e-107396BLASTN svgBLASTP svg
NC_003198:3042000*3042000306436622367Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-107396BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome2e-100375BLASTN svgBLASTP svg
NC_011740:28599332859933288499725065Escherichia fergusonii ATCC 35469, complete genome2e-81311BLASTN svgBLASTP svg
NC_013956:66329566329568566022366Pantoea ananatis LMG 20103 chromosome, complete genome2e-57232BLASTN svgBLASTP svg
NC_020260:440000*44000046819628197Cronobacter sakazakii Sp291, complete genome3e-56228BLASTN svgBLASTP svg
NC_012880:2399205*2399205242050221298Dickeya dadantii Ech703, complete genome2e-48202BLASTN svgBLASTP svg
NC_009649:948719487111709922229Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,1e-43186BLASTN svgBLASTP svg
NC_014121:4299500*4299500433477235273Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete6e-42180BLASTN svgBLASTP svg
NC_007384:307013*30701333111524103Shigella sonnei Ss046, complete genome2e-38168BLASTN svgBLASTP svg
NC_020181:4800298*4800298483905538758Enterobacter aerogenes EA1509E, complete genome9e-35157BLASTN svgBLASTP svg
NC_012779:3176820*3176820323178054961Edwardsiella ictaluri 93-146, complete genome5e-33151BLASTN svgBLASTP svg
NC_013592:713036*71303676182148786Dickeya dadantii Ech586, complete genome2e-32149BLASTN svgBLASTP svg
NC_012912:3853377*3853377389607042694Dickeya zeae Ech1591, complete genome2e-32149BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome8e-32147BLASTN svgBLASTP svg
NC_011750:10940001094000111509921100Escherichia coli IAI39 chromosome, complete genome2e-29139BLASTN svgBLASTP svg
CP002797:2062006*2062006208330121296Escherichia coli NA114, complete genome5e-27131BLASTN svgBLASTP svg
NC_004431:23042802304280233659932320Escherichia coli CFT073, complete genome5e-27131BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome1e-21113BLASTN svgBLASTP svg
NC_020063:2565605*2565605259927233668Enterobacteriaceae bacterium strain FGI 57, complete genome5e-21111BLASTN svgBLASTP svg
NC_020064:3825916*3825916385292327008Serratia marcescens FGI94, complete genome7e-20107BLASTN svgBLASTP svg
NC_008343:88184*8818411285024667Granulibacter bethesdensis CGDNIH1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008825:25649652564965258966024696Methylibium petroleiphilum PM1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-1799.6BLASTN svgBLASTP svg
NC_012912:84433984433986800523667Dickeya zeae Ech1591, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1799.6BLASTN svgBLASTP svg
NC_004460:97373897373899864424907Vibrio vulnificus CMCP6 chromosome II, complete sequence3e-1695.6BLASTN svgBLASTP svg
NC_015424:2357600*2357600239563038031Aeromonas veronii B565 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013520:718732*71873273509916368Veillonella parvula DSM 2008, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_019897:26965872696587272049823912Thermobacillus composti KWC4 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_003143:87536787536791053535169Yersinia pestis CO92, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_004088:35053833505383354055935177Yersinia pestis KIM, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_005810:31423843142384317894536562Yersinia pestis biovar Microtus str. 91001, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_006155:35961203596120363277836659Yersinia pseudotuberculosis IP 32953, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008149:33732293373229340909935871Yersinia pestis Nepal516, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008150:51378351378354909935317Yersinia pestis Antiqua, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010159:34484903448490348540936920Yersinia pestis Angola, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010465:11181471118147115423036084Yersinia pseudotuberculosis YPIII, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010634:35098803509880354653836659Yersinia pseudotuberculosis PB1/+, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_004547:843475*84347586442120947Erwinia carotovora subsp. atroseptica SCRI1043, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_011002:70319470319475464351450Burkholderia cenocepacia J2315 chromosome 3, complete sequence3e-1385.7BLASTN svgBLASTP svg
NC_007650:42074542074544753126787Burkholderia thailandensis E264 chromosome II, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_007650:841408414010870224563Burkholderia thailandensis E264 chromosome II, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_007651:1620000*1620000165256732568Burkholderia thailandensis E264 chromosome I, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_007651:17264721726472175232825857Burkholderia thailandensis E264 chromosome I, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_008253:3122148*3122148315923237085Escherichia coli 536, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015224:10673901067390110671739328Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-1283.8BLASTN svgBLASTP svg
NC_010002:45084674508467453496626500Delftia acidovorans SPH-1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_020064:3998715*3998715409080492090Serratia marcescens FGI94, complete genome6e-1177.8BLASTN svgBLASTP svg
AP010958:36273553627355365976432410Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-1075.8BLASTN svgBLASTP svg
AP010958:5090696*5090696512565934964Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_002655:39195453919545394618926645Escherichia coli O157:H7 EDL933, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_002695:38522333852233387887626644Escherichia coli O157:H7 str. Sakai, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-1075.8BLASTN svgBLASTP svg
NC_014215:34991734991737916229246Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,3e-1075.8BLASTN svgBLASTP svg
NC_010520:31205003120500313949618997Clostridium botulinum A3 str. Loch Maree, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_002516:77678777678780223925453Pseudomonas aeruginosa PAO1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_006526:12020001202000121991217913Zymomonas mobilis subsp. mobilis ZM4, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014121:16826381682638172492542288Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-0661.9BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,4e-0661.9BLASTN svgBLASTP svg
NC_008044:1401814*1401814142133819525Silicibacter sp. TM1040, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_005139:51876051876053705318294Vibrio vulnificus YJ016 chromosome I, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_014121:20906302090630212903438405Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-0661.9BLASTN svgBLASTP svg
NC_014121:23304512330451236009929649Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-0661.9BLASTN svgBLASTP svg
NC_014121:35538093553809358001526207Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-0661.9BLASTN svgBLASTP svg
NC_014121:48950048950052159932100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-0661.9BLASTN svgBLASTP svg
NC_014121:50000695000069503057530507Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-0661.9BLASTN svgBLASTP svg
NC_014121:677799*67779969989822100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-0661.9BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_020911:2921925*2921925299019968275Octadecabacter antarcticus 307, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004578:21246821246824209929632Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-0661.9BLASTN svgBLASTP svg