Pre_GI: BLASTN Hits

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Query: NC_012731:2083650 Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome

Start: 2083650, End: 2113599, Length: 29950

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a liver abscess. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013850:3340882*3340882337329232411Klebsiella variicola At-22 chromosome, complete genome010330BLASTN svgBLASTP svg
NC_009792:17399701739970176500625037Citrobacter koseri ATCC BAA-895, complete genome01653BLASTN svgBLASTP svg
NC_013716:12989321298932132714328212Citrobacter rodentium ICC168, complete genome01633BLASTN svgBLASTP svg
AC_000091:1191353*1191353122209930747Escherichia coli W3110 DNA, complete genome01572BLASTN svgBLASTP svg
AP010958:1339263*1339263136273323471Escherichia coli O103:H2 str. 12009 DNA, complete genome01572BLASTN svgBLASTP svg
CU928145:1300863*1300863132330622444Escherichia coli 55989 chromosome, complete genome01572BLASTN svgBLASTP svg
NC_000913:1188999*1188999122144532447Escherichia coli K12, complete genome01572BLASTN svgBLASTP svg
NC_010468:2699000*2699000272285223853Escherichia coli ATCC 8739, complete genome01572BLASTN svgBLASTP svg
NC_010473:1245284*1245284127191826635Escherichia coli str. K-12 substr. DH10B, complete genome01572BLASTN svgBLASTP svg
NC_010498:1995500*1995500202472729228Escherichia coli SMS-3-5, complete genome01572BLASTN svgBLASTP svg
NC_011748:1300863*1300863132330622444Escherichia coli 55989, complete genome01572BLASTN svgBLASTP svg
CU928160:1232510*1232510125609923590Escherichia coli IAI1 chromosome, complete genome01564BLASTN svgBLASTP svg
NC_011751:1405381*1405381142709921719Escherichia coli UMN026 chromosome, complete genome01564BLASTN svgBLASTP svg
NC_009801:1296488*1296488132313526648Escherichia coli E24377A, complete genome01556BLASTN svgBLASTP svg
CP002516:2786000*2786000281204426045Escherichia coli KO11, complete genome01556BLASTN svgBLASTP svg
CP002185:1298675*1298675132326124587Escherichia coli W, complete genome01556BLASTN svgBLASTP svg
NC_010658:1193225*1193225121671123487Shigella boydii CDC 3083-94, complete genome01540BLASTN svgBLASTP svg
NC_014121:2514544*2514544255659942056Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01540BLASTN svgBLASTP svg
NC_013282:1804909*1804909182709922191Cronobacter turicensis, complete genome01526BLASTN svgBLASTP svg
NC_020181:51305135130513517631045798Enterobacter aerogenes EA1509E, complete genome01493BLASTN svgBLASTP svg
NC_011083:1323827*1323827134240718581Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,01354BLASTN svgBLASTP svg
NC_011080:1321268*1321268133914217875Salmonella enterica subsp. enterica serovar Newport str. SL254,01346BLASTN svgBLASTP svg
NC_003197:1320861*1320861134738426524Salmonella typhimurium LT2, complete genome01330BLASTN svgBLASTP svg
NC_011149:1870931*1870931190072529795Salmonella enterica subsp. enterica serovar Agona str. SL483,01314BLASTN svgBLASTP svg
NC_008563:1175035*1175035119859923565Escherichia coli APEC O1, complete genome01277BLASTN svgBLASTP svg
NC_007946:1239278*1239278125938320106Escherichia coli UTI89, complete genome01277BLASTN svgBLASTP svg
NC_020064:1962172*1962172199309930928Serratia marcescens FGI94, complete genome01269BLASTN svgBLASTP svg
NC_009800:1254409*1254409127914624738Escherichia coli HS, complete genome01253BLASTN svgBLASTP svg
NC_020181:52170005217000524709930100Enterobacter aerogenes EA1509E, complete genome01235BLASTN svgBLASTP svg
NC_011740:18318451831845185021818374Escherichia fergusonii ATCC 35469, complete genome01231BLASTN svgBLASTP svg
NC_015567:2125415*2125415214809922685Serratia sp. AS9 chromosome, complete genome01178BLASTN svgBLASTP svg
NC_015566:2125403*2125403214809922697Serratia sp. AS12 chromosome, complete genome01178BLASTN svgBLASTP svg
NC_009832:2211154*2211154224619035037Serratia proteamaculans 568, complete genome01074BLASTN svgBLASTP svg
NC_014562:983398*983398101509931702Pantoea vagans C9-1 chromosome, complete genome01007BLASTN svgBLASTP svg
NC_015061:3147691*3147691317026522575Rahnella sp. Y9602 chromosome, complete genome0904BLASTN svgBLASTP svg
NC_012912:2216749*2216749224082124073Dickeya zeae Ech1591, complete genome0892BLASTN svgBLASTP svg
NC_014500:2589089*2589089260812419036Dickeya dadantii 3937 chromosome, complete genome0805BLASTN svgBLASTP svg
NC_012880:2425330*2425330245003424705Dickeya dadantii Ech703, complete genome0805BLASTN svgBLASTP svg
NC_010694:2189652*2189652221918829537Erwinia tasmaniensis, complete genome0733BLASTN svgBLASTP svg
NC_013850:21823372182337224909966763Klebsiella variicola At-22 chromosome, complete genome7e-171609BLASTN svgBLASTP svg
NC_009648:1541699*1541699160010958411Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-168601BLASTN svgBLASTP svg
NC_021150:2906471*2906471292809921629Azotobacter vinelandii CA6, complete genome4e-89337BLASTN svgBLASTP svg
NC_012560:2906459*2906459292809921641Azotobacter vinelandii DJ, complete genome4e-89337BLASTN svgBLASTP svg
NC_013716:27645502764550279838233833Citrobacter rodentium ICC168, complete genome3e-77297BLASTN svgBLASTP svg
NC_015663:45221094522109454904226934Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-72281BLASTN svgBLASTP svg
NC_010102:17797071779707181158331877Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-60242BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str7e-60240BLASTN svgBLASTP svg
NC_007712:1791766*1791766181730825543Sodalis glossinidius str. 'morsitans', complete genome1e-55226BLASTN svgBLASTP svg
NC_020181:53840155384015540784123827Enterobacter aerogenes EA1509E, complete genome6e-48200BLASTN svgBLASTP svg
NC_011751:14460731446073147872932657Escherichia coli UMN026 chromosome, complete genome6e-42180BLASTN svgBLASTP svg
NC_003295:26694802669480269721727738Ralstonia solanacearum GMI1000, complete genome8e-38167BLASTN svgBLASTP svg
NC_008253:12284851228485125292524441Escherichia coli 536, complete genome3e-37165BLASTN svgBLASTP svg
NC_009778:95998295998298509925118Enterobacter sakazakii ATCC BAA-894, complete genome5e-36161BLASTN svgBLASTP svg
NC_008563:12178041217804124159923796Escherichia coli APEC O1, complete genome8e-35157BLASTN svgBLASTP svg
NC_007946:12805081280508130218721680Escherichia coli UTI89, complete genome8e-35157BLASTN svgBLASTP svg
NC_013282:18424121842412187000127590Cronobacter turicensis, complete genome3e-34155BLASTN svgBLASTP svg
NC_004431:14439681443968146977025803Escherichia coli CFT073, complete genome8e-32147BLASTN svgBLASTP svg
NC_011750:19788011978801200896030160Escherichia coli IAI39 chromosome, complete genome8e-32147BLASTN svgBLASTP svg
NC_010995:2855595*2855595294415488560Cellvibrio japonicus Ueda107, complete genome3e-31145BLASTN svgBLASTP svg
NC_015563:63576536357653638561927967Delftia sp. Cs1-4 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_008563:2946391*2946391296667220282Escherichia coli APEC O1, complete genome1e-21113BLASTN svgBLASTP svg
NC_007946:29313642931364295051219149Escherichia coli UTI89, complete genome1e-21113BLASTN svgBLASTP svg
NC_004431:30409533040953306393422982Escherichia coli CFT073, complete genome1e-21113BLASTN svgBLASTP svg
NC_010554:10084441008444102773319290Proteus mirabilis HI4320, complete genome2e-20109BLASTN svgBLASTP svg
NC_008752:5213431*5213431523609922669Acidovorax avenae subsp. citrulli AAC00-1, complete genome7e-20107BLASTN svgBLASTP svg
NC_015677:39657163965716398829822583Ramlibacter tataouinensis TTB310 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_014121:16826381682638172492542288Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-19105BLASTN svgBLASTP svg
NC_008781:4178115*4178115422557447460Polaromonas naphthalenivorans CJ2, complete genome1e-18103BLASTN svgBLASTP svg
NC_012779:21849272184927220656121635Edwardsiella ictaluri 93-146, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_020211:20945002094500211209917600Serratia marcescens WW4, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015138:5276857*5276857530246825612Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-1695.6BLASTN svgBLASTP svg
NC_011750:5045927*5045927506827722351Escherichia coli IAI39 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_012559:23532362353236237609922864Laribacter hongkongensis HLHK9, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_007498:3085511*3085511310809922589Pelobacter carbinolicus DSM 2380, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009792:17701061770106179490624801Citrobacter koseri ATCC BAA-895, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_011080:2761403*2761403277959918197Salmonella enterica subsp. enterica serovar Newport str. SL254,6e-1487.7BLASTN svgBLASTP svg
NC_021066:2226826*2226826225422627401Raoultella ornithinolytica B6, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010102:18293571829357185417624820Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-1385.7BLASTN svgBLASTP svg
NC_008767:27375927375929740423646Neisseria meningitidis FAM18, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014837:23542412354241238131727077Pantoea sp. At-9b chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008820:22689002268900229243723538Prochlorococcus marinus str. MIT 9303, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011992:3615517*3615517363908923573Acidovorax ebreus TPSY, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_009801:17566101756610177871522106Escherichia coli E24377A, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011751:18596061859606188482925224Escherichia coli UMN026 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012803:2195808*2195808224976153954Micrococcus luteus NCTC 2665, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013850:985331985331100742022090Klebsiella variicola At-22 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012029:904780*90478093723732458Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007712:33820003382000340824226243Sodalis glossinidius str. 'morsitans', complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014117:442616*44261651580273187Burkholderia sp. CCGE1002 chromosome chromosome 1, complete4e-0661.9BLASTN svgBLASTP svg