Pre_GI: BLASTP Hits

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Query: NC_012686:356865:373985 Chlamydia trachomatis B/Jali20/OT chromosome, complete genome

Start: 373985, End: 374203, Length: 219

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Chlamydia trachomatis B/Jali20/OT is a clinical strain isolated from the conjunctiva in an active case of trachoma. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. Chlamydia trachomatis causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002620:705075:725946725946726164219Chlamydia muridarum Nigg, complete genomeexodeoxyribonuclease VII small subunit7e-33139
NC_017440:355205:372317372317372535219Chlamydia trachomatis G/11074 chromosome, complete genomeexodeoxyribonuclease VII small subunit7e-34142
NC_016798:360945:373939373939374157219Chlamydia trachomatis A2497, complete genomeexodeoxyribonuclease VII small subunit7e-34142
NC_010280:673211:690319690319690537219Chlamydia trachomatis L2b/UCH-1/proctitis, complete genomeexodeoxyribonuclease VII small subunit3e-33140
NC_017429:362482:372316372316372534219Chlamydia trachomatis G/9768 chromosome, complete genomeexodeoxyribonuclease VII small subunit7e-34142
NC_017432:355205:372317372317372535219Chlamydia trachomatis G/9301 chromosome, complete genomeexodeoxyribonuclease VII small subunit7e-34142
NC_017430:350668:371886371886372104219Chlamydia trachomatis G/11222 chromosome, complete genomeexodeoxyribonuclease VII small subunit2e-32137
NC_017437:360949:373942373942374160219Chlamydia trachomatis A2497 chromosome, complete genomeExodeoxyribonuclease VII small subunit7e-34142
NC_007429:356952:374064374064374282219Chlamydia trachomatis A/HAR-13, complete genomeexodeoxyribonuclease VII small subunit2e-33140
NC_014652:1758787:175853417585341758794261Caldicellulosiruptor hydrothermalis 108 chromosome, completeexodeoxyribonuclease vii, small subunit2e-0651.2
NC_015744:668665:689989689989690207219Chlamydia trachomatis L2c chromosome, complete genomeexonuclease VII small subunit3e-33140