Pre_GI: BLASTP Hits

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Query: NC_012668:83641:99962 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 99962, End: 101041, Length: 1080

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:514742:5193085193085203871080Vibrio cholerae IEC224 chromosome I, complete sequenceextracellular solute-binding protein0742
NC_016445:2938887:2943453294345329445321080Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeputative extracellular solute-binding protein0742
NC_002505:514732:5192985192985203771080Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeextracellular solute-binding protein, putative0742
NC_015497:2859724:2874240287424028753161077Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeExtracellular solute-binding protein, family 74e-129461
NC_017192:88940:8894088940900041065Arcobacter sp. L, complete genomeTRAP dicarboxylate ABC transporter substrate binding component1e-126453
NC_010506:4404377:4414103441410344151971095Shewanella woodyi ATCC 51908, complete genomeTRAP dicarboxylate transporter- DctP subunit2e-74280
NC_013166:194614:1954691954691965841116Kangiella koreensis DSM 16069, complete genomeTRAP dicarboxylate transporter- DctP subunit5e-65248
NC_008312:6801445:6815319681531968164251107Trichodesmium erythraeum IMS101, complete genomeTRAP dicarboxylate transporter- DctP subunit3e-62239
NC_008312:6801445:6816642681664268177271086Trichodesmium erythraeum IMS101, complete genomeTRAP dicarboxylate transporter- DctP subunit2e-55216
NC_008820:2512518:2512518251251825136421125Prochlorococcus marinus str. MIT 9303, complete genomepossible Tripartite transporter component (TRAP-T family), substrate binding protein2e-54213
NC_014153:2282725:2304953230495323060381086Thiomonas intermedia K12 chromosome, complete genomeExtracellular solute-binding protein, family 71e-53210
NC_014153:2282725:2306173230617323072551083Thiomonas intermedia K12 chromosome, complete genomeExtracellular solute-binding protein, family 73e-50199
NC_014758:1387470:1408979140897914100461068Calditerrivibrio nitroreducens DSM 19672 chromosome, completeextracellular solute-binding protein, family 71e-37157
NC_018643:1309804:1333127133312713342871161Alpha proteobacterium HIMB5 chromosome, complete genomeBacterial ABC superfamily ATP binding cassette transporter, binding protein, family 72e-28127
NC_016745:546249:555875555875556750876Oceanimonas sp. GK1 chromosome, complete genomeTRAP transporter DctP family protein9e-24111
NC_007645:3688000:3688251368825136892671017Hahella chejuensis KCTC 2396, complete genomeTRAP-type mannitol/chloroaromatic compound transport system, periplasmic component1e-23111
NC_014011:472650:4898554898554909221068Aminobacterium colombiense DSM 12261 chromosome, complete genomeExtracellular solute-binding protein, family 75e-1995.5
NC_006569:370846:3762033762033772221020Silicibacter pomeroyi DSS-3 megaplasmid, complete sequenceTRAP dicarboxylate family transporter, DctP subunit5e-1892.4
NC_014364:4488875:4510905451090545119091005Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeTRAP dicarboxylate transporter, DctP subunit4e-1479.3
NC_019903:2578966:2578966257896625800991134Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component6e-1479
NC_007963:2777066:2792565279256527936471083Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctP subunit2e-1273.9
NC_007969:1076287:1077587107758710786391053Psychrobacter cryohalolentis K5, complete genomeTRAP dicarboxylate transporter- DctP subunit6e-1168.9
NC_007509:1043602:104900310490031049989987Burkholderia sp. 383 chromosome 3, complete sequenceTRAP dicarboxylate transporter- DctP subunit6e-1065.5
NC_016642:1990684:200975720097572010731975Pseudovibrio sp. FO-BEG1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP9e-1065.1
NC_009439:4404942:4427124442712444281251002Pseudomonas mendocina ymp, complete genomeTRAP dicarboxylate transporter, DctP subunit3e-0963.2
NC_013740:2218215:2228533222853322295461014Acidaminococcus fermentans DSM 20731, complete genomeTRAP dicarboxylate transporter, DctP subunit9e-0961.6
NC_020911:18500:362213622137201981Octadecabacter antarcticus 307, complete genomeTRAP transporter periplasmatic solute-binding protein DctP2e-0860.1
NC_008392:666000:683207683207684193987Burkholderia cepacia AMMD chromosome 3, complete sequenceTRAP dicarboxylate transporter, DctP subunit2e-0860.1
NC_018581:759932:7701847701847713741191Gordonia sp. KTR9 chromosome, complete genomeTRAP-type C4-dicarboxylate transport system, periplasmic component7e-0858.5
NC_015573:813000:8433328433328443841053Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomefamily 7 extracellular solute-binding protein1e-0757.8
NC_014966:1668822:169116016911601692143984Vibrio vulnificus MO6-24/O chromosome II, complete sequenceTRAP-type C4-dicarboxylate transporter periplasmic protein3e-0756.6
NC_007963:317291:3172913172913183551065Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctP subunit4e-0755.8
NC_016629:3789554:3828241382824138292871047Desulfovibrio africanus str. Walvis Bay chromosome, completeextracellular solute-binding protein5e-0755.8
NC_007963:2777066:2785741278574127867511011Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter, DctP subunit7e-0755.1
NC_016513:1761830:176842317684231769415993Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDctP protein8e-0755.1
NC_015914:2230076:225379622537962254788993Cyclobacterium marinum DSM 745 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctP2e-0653.9
NC_008254:3143770:3155453315545331565411089Mesorhizobium sp. BNC1, complete genomeTRAP dicarboxylate transporter- DctP subunit2e-0653.9
NC_015565:1511426:1528392152839215294141023Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTRAP dicarboxylate transporter subunit DctP7e-0652