Pre_GI: BLASTP Hits

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Query: NC_012668:83641:90654 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 90654, End: 91328, Length: 675

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:514742:529019529019529693675Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-132471
NC_002505:514732:529011529011529685675Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-132471
NC_016944:514742:528313528313528957645Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein9e-34143
NC_002505:514732:528305528305528949645Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein9e-34143
NC_005139:796546:806984806984807628645Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-2098.6
NC_010322:5293652:531395953139595314558600Pseudomonas putida GB-1 chromosome, complete genometransposase3e-1479
NC_008322:2077628:208846620884662089143678Shewanella sp. MR-7, complete genomehypothetical protein8e-1373.9
NC_012691:1250385:127024212702421270910669Tolumonas auensis DSM 9187, complete genomehypothetical protein4e-1271.6
NC_008577:2115440:212463021246302125307678Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein5e-1271.2
NC_013456:212150:228379228379229041663Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein1e-1169.7
NC_015379:908904:935764935764936426663Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative prophage9e-1167
NC_012668:83641:900019000190600600Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-1066.2
NC_002505:514732:529739529739530338600Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-1065.9
NC_013421:1505176:151089815108981511509612Pectobacterium wasabiae WPP163, complete genomehypothetical protein4e-1065.1
NC_008321:1993541:200569020056902006352663Shewanella sp. MR-4, complete genomehypothetical protein6e-1064.3
AC_000091:273325:291546291546292172627Escherichia coli W3110 DNA, complete genomehypothetical protein1e-0963.2
NC_000913:272071:291546291546292172627Escherichia coli K12, complete genomeCP4-6 prophage; conserved protein1e-0963.2
NC_010473:247429:267096267096267722627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; conserved protein1e-0963.2
NC_009092:1441813:145080814508081451473666Shewanella loihica PV-4, complete genometransposase6e-0961.2
NC_013592:446092:463175463175463804630Dickeya dadantii Ech586, complete genomehypothetical protein1e-0860.1
NC_020418:116500:136581136581137168588Morganella morganii subsp. morganii KT, complete genometransposase2e-0859.7
NC_009708:915814:924077924077924703627Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-0859.3
NC_020064:3609844:362956736295673630199633Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF3296)7e-0857.4
NC_012691:2476223:249796124979612498647687Tolumonas auensis DSM 9187, complete genomehypothetical protein2e-0756.2
NC_013716:5201097:523347852334785234047570Citrobacter rodentium ICC168, complete genomehypothetical protein2e-0755.8
NC_010634:1342393:135022813502281350812585Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-0755.8
NC_018691:3525430:356448435644843565281798Alcanivorax dieselolei B5 chromosome, complete genomeConserved prophage protein4e-0754.7
NC_013353:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-0754.3
AP010958:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-0754.3
NC_004431:3409389:348439734843973484966570Escherichia coli CFT073, complete genomehypothetical protein7e-0754.3
NC_011751:3453683:350750035075003508105606Escherichia coli UMN026 chromosome, complete genomehypothetical protein9e-0753.9
CP002797:2062006:208273220827322083301570Escherichia coli NA114, complete genomehypothetical protein3e-0652
NC_013353:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein4e-0652
AP010958:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein4e-0652