Pre_GI: BLASTP Hits

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Query: NC_012668:83641:90001 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 90001, End: 90600, Length: 600

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002505:514732:529739529739530338600Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein7e-116416
NC_016944:514742:529852529852530346495Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein3e-94343
NC_016944:514742:528313528313528957645Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-1685.1
NC_002505:514732:528305528305528949645Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-1685.1
NC_016944:514742:529019529019529693675Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-1066.2
NC_012668:83641:906549065491328675Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-1066.2
NC_002505:514732:529011529011529685675Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-1066.2
NC_013421:1505176:151089815108981511509612Pectobacterium wasabiae WPP163, complete genomehypothetical protein4e-0651.6
NC_005139:796546:806984806984807628645Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein6e-0650.8