Pre_GI: BLASTP Hits

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Query: NC_012668:62500:80799 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 80799, End: 81242, Length: 444

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011663:2813033:281396928139692814424456Shewanella baltica OS223 chromosome, complete genomehypothetical protein4e-0753.5
NC_016944:1978058:199524619952461995422177Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein3e-1580.5
NC_016944:514742:539104539104539541438Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein3e-77286
NC_016944:1978058:199547319954731995919447Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein4e-0650.1
NC_017270:1755552:178587117858711786299429Vibrio cholerae LMA3984-4 chromosome chromosome I, completehypothetical protein4e-41166
NC_012668:1688500:169789616978961698342447Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein4e-0650.1
NC_012668:1688500:169839316983931698707315Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein4e-31133
NC_002505:514732:539097539097539540444Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein6e-84308
NC_002505:1931750:194916519491651949611447Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein4e-0650.1
NC_002505:1931750:194880019488001949114315Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein4e-31133
NC_016445:1363831:142056614205661421012447Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein4e-0650.1
NC_016445:1363831:142020114202011420515315Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein4e-31133
NC_009457:1444449:150190315019031502217315Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein4e-31133
NC_009457:1444449:150226815022681502714447Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein4e-0650.1
NC_012582:2013515:203368720336872034133447Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein4e-0650.1
NC_012582:2013515:203332220333222033636315Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein4e-31133
NC_016602:173314:184209184209184646438Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein4e-80296
NC_013456:212150:226063226063226488426Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein7e-1785.9
NC_005139:2201820:227336422733642273798435Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein5e-42169
NC_005139:796546:811990811990812424435Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein8e-58221