Pre_GI: BLASTP Hits

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Query: NC_012668:62500:75163 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 75163, End: 75978, Length: 816

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002505:514732:544362544362545177816Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, AraC/XylS family4e-138490
NC_016445:2938887:295541629554162956213798Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional regulator AraC/XylS family3e-135481
NC_005139:2201820:225498422549842255754771Vibrio vulnificus YJ016 chromosome I, complete sequenceAraC-type DNA-binding domain-containing protein3e-1892.4
NC_009901:1516340:152043815204381521247810Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, AraC family3e-1065.5
NC_010334:1561691:156569015656901566499810Shewanella halifaxensis HAW-EB4, complete genometranscriptional regulator, AraC family5e-1065.1
NC_018697:505915:5090685090685100901023Cycloclasticus sp. P1 chromosome, complete genomeAraC-family transcriptional regulator3e-0962.4
NC_004603:370320:378312378312379037726Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative CFA/I fimbrial subunit D5e-0755.1
NC_013508:3593000:359718135971813597945765Edwardsiella tarda EIB202, complete genomeAraC-type DNA-binding domain-containing protein3e-0652.4
NC_012779:3652737:366065036606503661414765Edwardsiella ictaluri 93-146, complete genomeporin thermoregulatory protein EnvY4e-0652