Pre_GI: BLASTP Hits

Some Help

Query: NC_012668:62500:70078 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 70078, End: 70153, Length: 76

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2938887:29612232961223296129876Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetRNA-Met5e-0753.1
NC_016602:3122700:31295863129586312966176Vibrio furnissii NCTC 11218 chromosome 1, complete sequencetRNA-Met3e-0650.4
NC_002505:514732:55018755018755026276Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetRNA-Met5e-0753.1