Pre_GI: BLASTP Hits

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Query: NC_012668:442601:462045 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 462045, End: 463643, Length: 1599

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:703852:7236167236167252141599Vibrio cholerae MJ-1236 chromosome 2, complete genomedeoxycytidylate deaminase-related protein01025
NC_002505:168532:1753431753431769411599Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completedeoxycytidylate deaminase-related protein01025
NC_016944:168530:1753411753411769301590Vibrio cholerae IEC224 chromosome I, complete sequencedeoxycytidylate deaminase-likeprotein01018
NC_016445:2593800:2600611260061126022001590Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completedeoxycytidylate deaminase-related protein01018
NC_004578:20738:5834458344599061563Pseudomonas syringae pv. tomato str. DC3000, complete genomecytidine/deoxycytidylate deaminase family protein1e-76287
NC_004547:138500:1488111488111503911581Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative deoxycytidylate deaminase7e-74278
NC_015572:1:4863448634501331500Methylomonas methanica MC09 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein1e-63244
NC_007614:109000:1249241249241263931470Nitrosospira multiformis ATCC 25196 chromosome 1, completeCytidine/deoxycytidylate deaminase, zinc-binding region2e-62240
NC_014910:465980:5007665007665024391674Alicycliphilus denitrificans BC chromosome, complete genomecmp/dcmp deaminase zinc-binding protein2e-59230
NC_016631:5478098:5491916549191654934541539Granulicella mallensis MP5ACTX8 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein2e-59230
NC_011894:585637:6096256096256113371713Methylobacterium nodulans ORS 2060, complete genomeCMP/dCMP deaminase zinc-binding8e-59228
NC_008825:564392:5718055718055733731569Methylibium petroleiphilum PM1, complete genomeputative cytidine deaminase5e-58225
NC_011004:3582078:3587744358774435892581515Rhodopseudomonas palustris TIE-1, complete genomeCMP/dCMP deaminase zinc-binding4e-53209
NC_011757:276953:2894972894972912061710Methylobacterium chloromethanicum CM4, complete genomeCMP/dCMP deaminase zinc-binding1e-52207
NC_010172:2082000:2087401208740120888671467Methylobacterium extorquens PA1, complete genomeCMP/dCMP deaminase zinc-binding3e-52206
NC_013861:728648:7343167343167358931578Legionella longbeachae NSW150, complete genomecytidine/deoxycytidylate deaminase2e-24114
NC_012780:430653:4370594370594389391881Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencedCMP deaminase2e-20100
NC_017186:2252438:228089522808952281389495Amycolatopsis mediterranei S699 chromosome, complete genomeCMP/dCMP deaminase zinc-binding protein6e-1686.3
NC_007963:814148:8218578218578236861830Chromohalobacter salexigens DSM 3043, complete genomeCMP/dCMP deaminase, zinc-binding9e-1582
NC_015555:2259500:228835222883522288837486Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeCMP/dCMP deaminase zinc-binding protein6e-1066.2
NC_019970:2551607:256020825602082560654447Thermoanaerobacterium thermosaccharolyticum M0795, complete genomedeoxycytidylate deaminase7e-1065.9
NC_008054:272801:285808285808286290483Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative dCMP deaminase2e-0861.2
NC_008529:264000:280313280313280759447Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeDeoxycytidylate deaminase2e-0861.2