Pre_GI: BLASTP Hits

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Query: NC_012668:442601:458581 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 458581, End: 459648, Length: 1068

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:168530:1793361793361804031068Vibrio cholerae IEC224 chromosome I, complete sequencepatatin-likeprotein1e-179629
NC_016445:2593800:2604606260460626056731068Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completepatatin-related protein1e-179629
NC_012667:703852:7201527201527212191068Vibrio cholerae MJ-1236 chromosome 2, complete genomepatatin-related protein1e-179629
NC_002505:168532:1793381793381804051068Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completepatatin-related protein1e-179629
NC_009348:1064664:1084080108408010851441065Aeromonas salmonicida subsp. salmonicida A449, complete genomepatatin family phospholipase5e-112404
NC_010803:634497:6465596465596475691011Chlorobium limicola DSM 245, complete genomePatatin2e-22106
NC_016947:2380500:2432586243258624337011116Mycobacterium intracellulare MOTT-02 chromosome, complete genomepatatin3e-21103
NC_008146:3349415:3366579336657933676941116Mycobacterium sp. MCS, complete genomePatatin3e-21103
NC_008705:3377697:3394861339486133959761116Mycobacterium sp. KMS, complete genomePatatin3e-21103
NC_009077:3323291:3340455334045533415701116Mycobacterium sp. JLS, complete genomePatatin3e-21103
NC_020541:2191600:2208772220877222098031032Rhodanobacter sp. 2APBS1, complete genomepatatin6e-2098.6
NC_020541:2264521:2274006227400622750371032Rhodanobacter sp. 2APBS1, complete genomepatatin6e-2098.6
NC_008573:195317:235902235902236840939Shewanella sp. ANA-3 plasmid 1, complete sequencePatatin7e-1995.1
NC_013173:1437464:1454347145434714554501104Desulfomicrobium baculatum DSM 4028, complete genomePatatin4e-1685.9
NC_013169:612456:629055629055629981927Kytococcus sedentarius DSM 20547, complete genomepatatin4e-1685.9
NC_010803:1132500:1142237114223711432501014Chlorobium limicola DSM 245, complete genomePatatin1e-1378.2
NC_008435:2658986:2746839274683927478851047Rhodopseudomonas palustris BisA53, complete genomePatatin2e-1273.9
NC_002978:549454:549882549882550790909Wolbachia endosymbiont of Drosophila melanogaster, complete genomepatatin family protein1e-1170.9
NC_010981:468465:484654484654485577924Wolbachia pipientis, complete genomepatatin family protein8e-1168.6
NC_009720:622262:6253996253996264301032Xanthobacter autotrophicus Py2, complete genomepatatin1e-1068.2
NC_010981:242500:275981275981276904924Wolbachia pipientis, complete genomepatatin family protein1e-0963.9
NC_004757:2730057:275047527504752751422948Nitrosomonas europaea ATCC 19718, complete genomePatatin5e-0858.9
NC_020541:3655223:3664950366495036659691020Rhodanobacter sp. 2APBS1, complete genomepatatin3e-0756.6