Pre_GI: BLASTP Hits

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Query: NC_012668:442601:457257 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 457257, End: 458567, Length: 1311

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002505:168532:1804191804191817291311Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein0870
NC_010725:5491491:5509112550911255102931182Methylobacterium populi BJ001, complete genomehypothetical protein7e-29128
NC_012667:703852:7188287188287201381311Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein0870
NC_009348:1064664:1082794108279410840801287Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein4e-161567
NC_016445:2593800:2605693260569326069971305Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0866
NC_016944:168530:1804231804231817271305Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein0866
NC_015730:1107840:1121841112184111230551215Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein4e-28125